Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1796

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1795: 10163 - K12844 PRPF31 U4/U6 small nuclear ribonucleoprotein PRP31, at 217358 to 219404 10163 mRNA_1796: 10164 - K10878 SPO11 meiotic recombination protein SPO11, at 219619 to 222270 10164 mRNA_1797: 10165 - KOG2641 Predicted seven transmembrane receptor - rhodopsin family, at 222381 to 224884 10165

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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219,243 + 0.5
219,552 - 2.0
219,861 + -0.4
219,868 + -0.2
220,123 + 10164 mRNA_1796 0.19 0.2
220,195 - 10164 mRNA_1796 0.22 -1.0
220,413 - 10164 mRNA_1796 0.30 2.0
220,731 - 10164 mRNA_1796 0.42 -0.9
220,736 + 10164 mRNA_1796 0.42 -0.3
221,041 + 10164 mRNA_1796 0.54 -1.3
221,053 - 10164 mRNA_1796 0.54 -0.8
222,824 + 10165 mRNA_1797 0.18 -0.4
222,829 + 10165 mRNA_1797 0.18 0.6
223,088 - 10165 mRNA_1797 0.28 0.9
223,226 - 10165 mRNA_1797 0.34 -0.2