Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1733

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1732: 10100 - Hypothetical Protein, at 63566 to 64770 10100 mRNA_1733: 10101 - KOG1021 Acetylglucosaminyltransferase EXT1/exostosin 1, at 65153 to 66958 10101 mRNA_1734: 10102 - KOG1721 FOG Zn-finger, at 67947 to 72087 10102

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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64,217 + 10100 mRNA_1732 0.54 0.5
64,217 + 10100 mRNA_1732 0.54 -0.2
64,240 - 10100 mRNA_1732 0.56 2.4
64,534 + 10100 mRNA_1732 0.80 1.2
64,623 + 10100 mRNA_1732 0.88 0.1
64,678 - -1.1
64,684 - 1.1
64,984 - 0.9
65,387 - 10101 mRNA_1733 0.13 0.2
65,397 + 10101 mRNA_1733 0.14 0.1
65,588 - 10101 mRNA_1733 0.24 0.4
65,608 + 10101 mRNA_1733 0.25 -1.0
65,620 + 10101 mRNA_1733 0.26 0.3
65,974 - 10101 mRNA_1733 0.45 0.2
66,397 + 10101 mRNA_1733 0.69 -1.3
66,419 - 10101 mRNA_1733 0.70 -0.9
66,746 - 10101 mRNA_1733 0.88 0.2
66,747 + 10101 mRNA_1733 0.88 1.0
66,777 + 10101 mRNA_1733 0.90 -0.4
67,020 - -1.5
67,043 - 1.9
67,152 - -0.9
67,162 - 0.1
67,213 - 0.5
67,320 + -0.3
67,320 - 0.2
67,321 - -0.9
67,399 - 0.2
67,464 - 0.7
67,470 + 0.1
67,477 - -0.1
67,543 - -0.7
67,543 - 0.2
67,594 - -0.6
67,638 + -0.1
67,670 - 0.5
67,671 - 0.7
67,709 - -1.2
67,848 + 2.2
67,858 + 0.5
67,900 - -0.5