Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1723

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1723: 10091 - KOG4157 beta-1,6-N-acetylglucosaminyltransferase, contains WSC domain, at 38655 to 42471 10091 mRNA_1724: 10092 - K08827 PRPF4B serine/threonine-protein kinase PRP4, at 43091 to 44788 10092

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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37,660 + -0.9
37,703 - 0.5
37,717 - -0.2
37,735 - 1.4
37,831 - 0.3
37,837 + -0.1
37,921 - -0.5
37,933 - 0.1
37,934 + -0.8
37,934 + -0.9
37,938 + 1.2
37,950 - 0.1
37,951 + 1.6
37,984 - 0.3
38,063 + -0.3
38,063 - -0.1
38,074 - 0.3
38,075 - 0.2
38,083 + 0.6
38,091 - 0.2
38,140 - 0.2
38,248 - 0.4
38,249 - 0.9
38,366 + -0.4
38,384 + 1.4
38,409 + -0.2
38,409 + 0.1
38,929 - 0.7
38,939 + 0.7
38,940 - 3.1
38,963 + -2.4
39,081 + 10091 mRNA_1723 0.11 0.5
39,111 + 10091 mRNA_1723 0.12 0.1
39,362 - 10091 mRNA_1723 0.19 -1.7
39,532 + 10091 mRNA_1723 0.23 -0.1
39,581 + 10091 mRNA_1723 0.24 -0.2
39,873 + 10091 mRNA_1723 0.32 -0.2
40,035 - 10091 mRNA_1723 0.36 0.9
40,066 - 10091 mRNA_1723 0.37 -0.4
40,393 + 10091 mRNA_1723 0.46 1.7
40,399 + 10091 mRNA_1723 0.46 1.4
40,404 - 10091 mRNA_1723 0.46 -0.9
40,421 + 10091 mRNA_1723 0.46 -0.7
40,498 - 10091 mRNA_1723 0.48 0.3
40,691 + 10091 mRNA_1723 0.53 1.5
41,019 - 10091 mRNA_1723 0.62 0.8
41,144 - 10091 mRNA_1723 0.65 0.2
41,221 - 10091 mRNA_1723 0.67 1.0
41,286 + 10091 mRNA_1723 0.69 1.0
41,447 + 10091 mRNA_1723 0.73 0.1
41,552 + 10091 mRNA_1723 0.76 0.6
41,624 + 10091 mRNA_1723 0.78 0.3
41,733 - 10091 mRNA_1723 0.81 -2.2
41,872 + 10091 mRNA_1723 0.84 0.3
41,929 + 10091 mRNA_1723 0.86 0.6
41,957 - 10091 mRNA_1723 0.87 0.2
41,973 + 10091 mRNA_1723 0.87 2.3
42,146 + 0.8
42,171 + -1.0
42,198 + 1.3
42,285 - 0.8
42,287 - 1.0
42,298 + 1.1
42,311 + 2.2
42,354 - 1.5
42,357 - 0.3
42,445 - 0.3
42,592 - -0.4
42,597 + 0.6
42,614 - 0.1
42,623 + 0.4
42,627 - -0.4
42,632 + 1.0
42,637 - 1.4
42,637 - 0.2
42,638 + 0.1
42,644 + 0.4
42,650 + -1.2
42,652 - -0.5
42,660 + -1.1
42,677 - 0.1
42,684 - 0.7
42,714 - -0.1
42,717 + -0.9
42,729 + 0.7
42,737 - 0.6
42,769 - 1.3
42,778 - 0.8
42,782 + 0.5
42,788 + -0.6
42,808 - 1.7
42,824 - 0.9
42,825 + 0.4
42,825 - 1.0
42,826 - 1.4
42,829 + 1.7
42,832 + -0.1
42,839 + 0.5
42,845 - 0.2
42,846 - 0.4
42,847 - 0.9
42,847 - -1.1
42,868 + 1.3
42,874 + -1.1
42,901 + 0.2
42,912 - 1.3
42,923 - 0.3
42,925 - 0.1
42,999 - 1.0
43,027 - 0.9
43,050 + 1.2