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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1629: 9997 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 754772 to 756288
9997
mRNA_1630: 9998 - SUPERFAMILY--SSF81383, at 756759 to 757602
9998
mRNA_1631: 9999 - BLAST Tyrosine-protein phosphatase non-receptor type 23 [St..., at 757960 to 758498
9999
mRNA_1632: 10000 - K00036 G6PD, zwf glucose-6-phosphate 1-dehydrogenase, at 760062 to 761705
10000
mRNA_1633: 10001 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 762446 to 764135
10001
Group
Condition
mRNA_1629
mRNA_1630
mRNA_1631
mRNA_1632
mRNA_1633
9997
9998
9999
10000
10001
growth on oleic acid
YNB Oleic Acid
-0.0
0.3
-0.4
-0.8
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
0.3
-0.6
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
0.4
-0.8
-0.3
-0.1
growth on ricinoleic acid
YNB Glucose
0.2
0.1
-0.4
-0.6
auxotrophy
Dropout Complete
-0.2
-0.0
0.1
-0.4
auxotrophy
YNB Glucose 75mM Arginine
0.1
0.3
-0.3
-0.7
auxotrophy
YNB Glucose 75mM Methionine
0.1
0.1
-0.3
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
0.4
0.2
-0.2
-0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.2
-0.4
0.6
growth on ypd
YPD
0.0
0.5
0.2
-0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
0.4
0.1
-0.3
auxotrophy
YNB Glucose
0.2
0.4
-0.1
-0.2
growth on oleic acid
YNB Glucose
0.2
0.7
0.1
-0.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.5
0.0
0.0
0.0
ypd buoyancy
40 hrs High Buoyancy
0.4
0.3
0.2
0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.0
1.0
0.2
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.7
0.4
0.1
0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.7
0.7
0.3
0.3
ypd buoyancy
40 hrs Median Buoyancy
0.3
0.8
0.5
0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.8
0.1
0.6
0.7
ypd buoyancy
40 hrs No Buoyancy Separation
0.3
0.6
0.1
1.5
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