Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1629: 9997 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 754772 to 756288 9997 mRNA_1630: 9998 - SUPERFAMILY--SSF81383, at 756759 to 757602 9998 mRNA_1631: 9999 - BLAST Tyrosine-protein phosphatase non-receptor type 23 [St..., at 757960 to 758498 9999 mRNA_1632: 10000 - K00036 G6PD, zwf glucose-6-phosphate 1-dehydrogenase, at 760062 to 761705 10000 mRNA_1633: 10001 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 762446 to 764135 10001
Group Condition mRNA_1629 mRNA_1630 mRNA_1631 mRNA_1632 mRNA_1633
9997
9998
9999
10000
10001
growth on oleic acid YNB Oleic Acid -0.0 0.3 -0.4   -0.8
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 0.3 -0.6   -0.5
facs on lipid accumulation Sorted No BODIPY Gate 0.4 -0.8 -0.3   -0.1
growth on ricinoleic acid YNB Glucose 0.2 0.1 -0.4   -0.6
auxotrophy Dropout Complete -0.2 -0.0 0.1   -0.4
auxotrophy YNB Glucose 75mM Arginine 0.1 0.3 -0.3   -0.7
auxotrophy YNB Glucose 75mM Methionine 0.1 0.1 -0.3   -0.4
facs on lipid accumulation Sorted High BODIPY Gate 0.4 0.2 -0.2   -0.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.2 -0.4   0.6
growth on ypd YPD 0.0 0.5 0.2   -0.7
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 0.4 0.1   -0.3
auxotrophy YNB Glucose 0.2 0.4 -0.1   -0.2
growth on oleic acid YNB Glucose 0.2 0.7 0.1   -0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.5 0.0 0.0   0.0
ypd buoyancy 40 hrs High Buoyancy 0.4 0.3 0.2   0.0
ypd buoyancy 40 hrs Low Buoyancy -0.0 1.0 0.2   0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.7 0.4 0.1   0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.7 0.7 0.3   0.3
ypd buoyancy 40 hrs Median Buoyancy 0.3 0.8 0.5   0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.8 0.1 0.6   0.7
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 0.6 0.1   1.5
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