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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1609: 9977 - HMMPfam-Ferritin-like domain-PF13668,SUPERFAMILY--SSF47240, at 712765 to 713275
9977
mRNA_1610: 9978 - HMMPfam-CrcB-like protein-PF02537, at 714472 to 715757
9978
mRNA_1611: 9979 - K04708 E1.1.1.102 3-dehydrosphinganine reductase, at 715902 to 717266
9979
mRNA_1612: 9980 - Hypothetical Protein, at 717528 to 719368
9980
mRNA_1613: 9981 - K01228 GCS1 mannosyl-oligosaccharide glucosidase, at 719549 to 722839
9981
Group
Condition
mRNA_1609
mRNA_1610
mRNA_1611
mRNA_1612
mRNA_1613
9977
9978
9979
9980
9981
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-1.3
-0.5
-0.2
auxotrophy
Dropout Complete
-0.8
-0.6
0.1
-0.6
auxotrophy
YNB Glucose 75mM Arginine
-0.4
-0.8
0.2
-0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-0.1
-0.2
-0.8
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
0.0
-0.1
-0.8
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.5
-0.3
-0.5
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.4
-0.4
0.2
-0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
-0.7
0.1
-0.6
growth on ypd
YPD
-0.2
-0.4
-0.6
0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.0
-1.0
0.0
0.2
ypd buoyancy
40 hrs High Buoyancy
-0.3
0.1
-0.2
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-0.1
0.1
-0.7
growth on oleic acid
YNB Oleic Acid
-0.2
0.3
-0.1
-0.3
growth on oleic acid
YNB Glucose
-0.3
0.3
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
-0.6
0.2
-0.2
auxotrophy
YNB Glucose
0.2
-0.1
0.5
-0.8
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
-0.5
0.4
0.0
growth on ricinoleic acid
YNB Glucose
-0.4
0.9
0.2
-0.7
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.0
0.2
0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.3
-0.1
0.2
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.0
0.1
0.4
0.4
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