Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1608: 9976 - K19704 PTC1 protein phosphatase PTC1, at 709938 to 711637 9976 mRNA_1609: 9977 - HMMPfam-Ferritin-like domain-PF13668,SUPERFAMILY--SSF47240, at 712765 to 713275 9977 mRNA_1610: 9978 - HMMPfam-CrcB-like protein-PF02537, at 714472 to 715757 9978 mRNA_1611: 9979 - K04708 E1.1.1.102 3-dehydrosphinganine reductase, at 715902 to 717266 9979 mRNA_1612: 9980 - Hypothetical Protein, at 717528 to 719368 9980
Group Condition mRNA_1608 mRNA_1609 mRNA_1610 mRNA_1611 mRNA_1612
9976
9977
9978
9979
9980
ypd buoyancy 40 hrs No Buoyancy Separation -1.2 -0.1 -1.3   -0.5
auxotrophy Dropout Complete -0.6 -0.8 -0.6   0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 -0.5 -0.3   -0.5
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.4 -0.8   0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 0.0 -1.0   0.0
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.4 -0.4   0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.3 -0.1   -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.5 0.0   -0.1
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.3 0.1   -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 0.2 -0.7   0.1
growth on ypd YPD 0.8 -0.2 -0.4   -0.6
growth on oleic acid YNB Oleic Acid -0.3 -0.2 0.3   -0.1
growth on oleic acid YNB Glucose -0.0 -0.3 0.3   -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.2 -0.6   0.2
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 -0.0   0.2
auxotrophy YNB Glucose -0.5 0.2 -0.1   0.5
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.0 0.1   0.4
facs on lipid accumulation Sorted High BODIPY Gate 0.4 0.1 -0.1   0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.6 -0.0 -0.5   0.4
growth on ricinoleic acid YNB Glucose -0.2 -0.4 0.9   0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3 0.3 -0.1   0.2
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