Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1607: 9975 - HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 706172 to 709618 9975 mRNA_1608: 9976 - K19704 PTC1 protein phosphatase PTC1, at 709938 to 711637 9976 mRNA_1609: 9977 - HMMPfam-Ferritin-like domain-PF13668,SUPERFAMILY--SSF47240, at 712765 to 713275 9977 mRNA_1610: 9978 - HMMPfam-CrcB-like protein-PF02537, at 714472 to 715757 9978 mRNA_1611: 9979 - K04708 E1.1.1.102 3-dehydrosphinganine reductase, at 715902 to 717266 9979
Group Condition mRNA_1607 mRNA_1608 mRNA_1609 mRNA_1610 mRNA_1611
9975
9976
9977
9978
9979
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -1.2 -0.1 -1.3  
auxotrophy Dropout Complete 0.0 -0.6 -0.8 -0.6  
auxotrophy YNB Glucose 75mM Arginine 0.0 -0.2 -0.4 -0.8  
facs on lipid accumulation Sorted Low BODIPY Gate 0.0 0.1 0.0 -1.0  
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.2 -0.4 -0.4  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.0 -0.5 -0.3  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 -0.0 0.2 -0.7  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 -0.0 -0.3 -0.1  
ypd buoyancy 40 hrs High Buoyancy 0.0 -0.2 -0.3 0.1  
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 -0.0 -0.5 0.0  
auxotrophy YNB Glucose 0.2 -0.5 0.2 -0.1  
growth on oleic acid YNB Oleic Acid 0.1 -0.3 -0.2 0.3  
facs on lipid accumulation Sorted No BODIPY Gate -0.2 0.6 -0.0 -0.5  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 0.1 0.2 -0.6  
growth on oleic acid YNB Glucose 0.0 -0.0 -0.3 0.3  
ypd buoyancy 40 hrs Median Buoyancy 0.3 -0.0 -0.1 -0.0  
facs on lipid accumulation Sorted High BODIPY Gate -0.2 0.4 0.1 -0.1  
ypd buoyancy 40 hrs Low Buoyancy 0.2 -0.2 -0.0 0.1  
growth on ypd YPD 0.1 0.8 -0.2 -0.4  
growth on ricinoleic acid YNB Glucose 0.0 -0.2 -0.4 0.9  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 0.3 0.3 -0.1  
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