Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1605: 9973 - Hypothetical Protein, at 703733 to 704608 9973 mRNA_1606: 9974 - Hypothetical Protein, at 705021 to 705665 9974 mRNA_1607: 9975 - HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 706172 to 709618 9975 mRNA_1608: 9976 - K19704 PTC1 protein phosphatase PTC1, at 709938 to 711637 9976 mRNA_1609: 9977 - HMMPfam-Ferritin-like domain-PF13668,SUPERFAMILY--SSF47240, at 712765 to 713275 9977
Group Condition mRNA_1605 mRNA_1606 mRNA_1607 mRNA_1608 mRNA_1609
9973
9974
9975
9976
9977
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 -3.2 -0.1 -1.2 -0.1
auxotrophy Dropout Complete -0.1 -0.7 0.0 -0.6 -0.8
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.7 0.0 0.1 0.0
auxotrophy YNB Glucose -0.3 -0.4 0.2 -0.5 0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.3 0.1 -0.2 -0.4
growth on oleic acid YNB Oleic Acid -0.2 -0.1 0.1 -0.3 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.5 -1.3 0.0 -0.0 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 -1.5 0.2 0.1 0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.0 0.1 -0.0 -0.5
growth on ricinoleic acid YNB Glucose -0.3 0.3 0.0 -0.2 -0.4
auxotrophy YNB Glucose 75mM Arginine 0.2 -0.3 0.0 -0.2 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.6 -0.7 0.1 0.0 -0.5
ypd buoyancy 40 hrs High Buoyancy 0.5 -0.3 0.0 -0.2 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.3 0.3 -0.0 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 0.1 0.1 -0.0 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 -1.4 0.4 0.3 0.3
ypd buoyancy 40 hrs Low Buoyancy 0.5 -0.2 0.2 -0.2 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.1 0.5 -0.2 0.4 0.1
growth on oleic acid YNB Glucose 0.4 0.6 0.0 -0.0 -0.3
facs on lipid accumulation Sorted No BODIPY Gate 0.1 0.4 -0.2 0.6 -0.0
growth on ypd YPD -0.4 0.8 0.1 0.8 -0.2
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