Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1598: 9966 - Hypothetical Protein, at 689711 to 690052 9966 mRNA_1599: 9967 - HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 690460 to 691819 9967 mRNA_1600: 9968 - K12178 COPS4, CSN4 COP9 signalosome complex subunit 4, at 692318 to 693945 9968 mRNA_1601: 9969 - HMMPfam-Protein of unknown function (DUF1682)-PF07946,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 694292 to 695992 9969 mRNA_1602: 9970 - HMMPfam-Protein of unknown function (DUF2013)-PF09431, at 696270 to 698823 9970
Group Condition mRNA_1598 mRNA_1599 mRNA_1600 mRNA_1601 mRNA_1602
9966
9967
9968
9969
9970
growth on ricinoleic acid YNB Ricinoleic Acid   -0.4 -1.7 -0.6 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid   -1.1 -0.9 -0.5 0.5
facs on lipid accumulation Sorted High BODIPY Gate   -0.2 -0.7 -0.4 -0.6
growth on oleic acid YNB Oleic Acid   -0.1 -1.2 -0.4 -0.0
auxotrophy YNB Glucose 75mM Methionine   -0.5 -1.0 -0.1 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.2 -0.6 -0.1 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation   -0.1 -1.1 0.3 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.3 -0.0 -0.2 -0.8
auxotrophy Dropout Complete   0.1 -0.6 -0.1 0.0
auxotrophy YNB Glucose 75mM Arginine   -0.1 -0.5 -0.0 0.1
auxotrophy YNB Glucose   -0.1 -0.7 0.2 0.3
growth on ricinoleic acid YNB Glucose   -0.6 -0.8 0.3 0.7
growth on oleic acid YNB Glucose   0.1 -0.6 0.1 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.2 0.5 -0.4 -0.5
facs on lipid accumulation Sorted No BODIPY Gate   0.5 -0.5 0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate   0.5 -0.5 -0.0 -0.1
ypd buoyancy 40 hrs Low Buoyancy   -0.0 0.2 0.3 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.3 0.2 0.1 0.8
ypd buoyancy 40 hrs Median Buoyancy   0.1 0.4 0.3 0.2
growth on ypd YPD   0.5 0.9 0.0 -0.2
ypd buoyancy 40 hrs High Buoyancy   0.6 0.5 0.3 -0.1
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