Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1591: 9959 - K01835 pgm phosphoglucomutase, at 673406 to 675711 9959 mRNA_1592: 9960 - HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 676262 to 677615 9960 mRNA_1593: 9961 - KOG4366 Predicted thioesterase, at 678647 to 679781 9961 mRNA_1594: 9962 - K16261 YAT yeast amino acid transporter, at 681003 to 683049 9962 mRNA_1595: 9963 - K13342 PEX5, PXR1 peroxin-5, at 683358 to 685744 9963
Group Condition mRNA_1591 mRNA_1592 mRNA_1593 mRNA_1594 mRNA_1595
9959
9960
9961
9962
9963
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -0.2 -0.9 -0.2  
ypd buoyancy 40 hrs Low Buoyancy -0.9 -0.2 0.2 0.1  
growth on oleic acid YNB Oleic Acid 0.1 -0.1 -0.4 -0.2  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 0.2 -0.5 -0.1  
growth on oleic acid YNB Glucose 0.2 -0.1 -0.2 -0.2  
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 0.1 0.3 0.0  
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.2 0.0 0.1  
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.4 0.2 0.3  
auxotrophy YNB Glucose 75mM Arginine -0.2 0.2 -0.1 -0.0  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.3 0.1 0.4  
auxotrophy Dropout Complete -0.2 0.0 0.1 0.0  
growth on ricinoleic acid YNB Glucose 0.1 0.1 -0.2 0.0  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.2 0.2 0.4  
facs on lipid accumulation Sorted High BODIPY Gate 0.1 0.1 0.0 0.0  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 -0.4 0.1 0.5  
ypd buoyancy 40 hrs No Buoyancy Separation 0.7 -0.4 0.2 -0.3  
growth on ypd YPD -0.3 -0.1 0.2 0.4  
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.4 0.7 -0.1  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.1 0.1 0.4  
auxotrophy YNB Glucose 0.2 0.1 0.0 0.1  
ypd buoyancy 40 hrs Median Buoyancy 0.6 -0.2 0.4 0.1  
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