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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1589: 9957 - Hypothetical Protein, at 666700 to 668966
9957
mRNA_1590: 9958 - KOG0586 Serine/threonine protein kinase, at 669702 to 673169
9958
mRNA_1591: 9959 - K01835 pgm phosphoglucomutase, at 673406 to 675711
9959
mRNA_1592: 9960 - HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 676262 to 677615
9960
mRNA_1593: 9961 - KOG4366 Predicted thioesterase, at 678647 to 679781
9961
Group
Condition
mRNA_1589
mRNA_1590
mRNA_1591
mRNA_1592
mRNA_1593
9957
9958
9959
9960
9961
facs on lipid accumulation
Sorted No BODIPY Gate
-1.6
-0.9
-0.3
-0.4
0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-2.0
-0.4
-0.6
0.1
0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-1.7
-0.5
-0.2
-0.3
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.8
-0.3
-0.4
-0.2
-0.9
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-1.8
-0.1
0.0
-0.4
0.1
auxotrophy
Dropout Complete
-1.6
-0.3
-0.2
0.0
0.1
auxotrophy
YNB Glucose 75mM Arginine
-1.4
-0.4
-0.2
0.2
-0.1
growth on oleic acid
YNB Oleic Acid
-1.2
-0.1
0.1
-0.1
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-1.7
0.3
-0.2
-0.2
0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.9
-0.1
-0.2
-0.2
0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.5
0.1
-0.9
-0.2
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-1.0
-0.3
-0.1
0.1
0.1
auxotrophy
YNB Glucose
-1.7
0.2
0.2
0.1
0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.9
-0.2
0.1
0.1
0.0
growth on oleic acid
YNB Glucose
-1.0
0.2
0.2
-0.1
-0.2
growth on ricinoleic acid
YNB Glucose
-0.3
-0.1
0.1
0.1
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.3
-0.2
-0.2
0.2
-0.5
ypd buoyancy
40 hrs Median Buoyancy
-1.3
0.5
0.6
-0.2
0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.8
0.4
0.7
-0.4
0.2
growth on ypd
YPD
0.5
0.4
-0.3
-0.1
0.2
ypd buoyancy
40 hrs High Buoyancy
-0.4
0.9
0.1
-0.4
0.7
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