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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1577: 9945 - K03844 ALG11 alpha-1,2-mannosyltransferase, at 637857 to 639925
9945
mRNA_1578: 9946 - K20237 NUD1 protein NUD1, at 640262 to 646467
9946
mRNA_1579: 9947 - Hypothetical Protein, at 648385 to 649747
9947
mRNA_1580: 9948 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 650033 to 651263
9948
mRNA_1581: 9949 - HMMPfam-Protein of unknown function (DUF3759)-PF12585, at 651787 to 652843
9949
Group
Condition
mRNA_1577
mRNA_1578
mRNA_1579
mRNA_1580
mRNA_1581
9945
9946
9947
9948
9949
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-1.2
0.3
-0.6
growth on oleic acid
YNB Oleic Acid
0.0
-1.0
0.2
-0.9
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.7
-0.2
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-0.7
-0.3
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
-0.7
0.2
-0.5
growth on ricinoleic acid
YNB Glucose
0.3
-0.4
0.3
-1.0
auxotrophy
Dropout Complete
-0.2
-0.3
0.1
-0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.4
0.0
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.4
-0.5
0.0
-0.6
growth on oleic acid
YNB Glucose
0.0
-0.4
-0.1
-0.1
auxotrophy
YNB Glucose
0.0
-0.3
0.2
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.4
0.0
0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.1
0.1
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.2
-0.6
0.7
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.2
-0.2
0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
0.6
-0.7
0.8
-0.7
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
0.2
-0.5
0.4
growth on ypd
YPD
-0.0
0.2
0.2
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.3
-0.4
0.4
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.2
0.2
0.0
0.2
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.0
0.0
0.6
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