Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1571: 9939 - K03695 clpB ATP-dependent Clp protease ATP-binding subunit ClpB, at 620682 to 623667 9939 mRNA_1572: 9940 - K02139 ATPeFF, ATP17 F-type H+-transporting ATPase subunit f, at 624173 to 624749 9940 mRNA_1573: 9941 - KOG2022 Nuclear transport receptor LGL2 (importin beta superfamily), at 625284 to 628967 9941 mRNA_1574: 9942 - K06867 K06867 uncharacterized protein, at 629129 to 634398 9942 mRNA_1575: 9943 - BLAST cipC protein [Aspergillus oryzae RIB40], at 634965 to 635420 9943
Group Condition mRNA_1571 mRNA_1572 mRNA_1573 mRNA_1574 mRNA_1575
9939
9940
9941
9942
9943
facs on lipid accumulation Sorted High BODIPY Gate -0.1   -0.1 -2.9 -0.9
facs on lipid accumulation Sorted No BODIPY Gate 0.2   0.2 -2.3 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3   -0.5 -1.1 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3   -0.5 -1.8 0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.5   -0.5 -2.1 0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2   -0.4 -1.5 0.2
growth on ricinoleic acid YNB Glucose 0.1   -0.1 -1.1 -0.0
auxotrophy YNB Glucose 75mM Arginine 0.5   -0.4 -0.4 -0.3
auxotrophy Dropout Complete 0.6   -0.1 -0.8 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3   -0.1 -0.4 0.2
auxotrophy YNB Glucose 0.4   -0.2 -0.2 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation -1.1   0.7 0.0 0.0
ypd buoyancy 40 hrs Low Buoyancy -0.6   0.1 0.2 -0.0
auxotrophy YNB Glucose 75mM Methionine 0.4   -0.3 0.0 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate 0.5   0.3 -1.1 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1   0.2 -0.2 0.2
growth on ypd YPD -0.8   -0.0 1.1 -0.1
growth on oleic acid YNB Oleic Acid -0.1   -0.2 0.4 0.1
ypd buoyancy 40 hrs High Buoyancy -0.0   -0.2 0.1 0.5
growth on oleic acid YNB Glucose 0.1   -0.1 0.4 0.2
ypd buoyancy 40 hrs Median Buoyancy 0.2   0.2 0.6 -0.1
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