Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_1556: 9924 - KOG3114 Uncharacterized conserved protein, at 587080 to 588305 9924 mRNA_1557: 9925 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 588478 to 590403 9925 mRNA_1558: 9926 - KOG4155 FOG WD40 repeat, at 590667 to 593724 9926 mRNA_1559: 9927 - Hypothetical Protein, at 594333 to 596246 9927 mRNA_1560: 9928 - HMMPfam-Bromodomain-PF00439,ProSiteProfiles-Bromodomain profile.-PS50014,SMART-bromo domain-SM00297,SUPERFAMILY--SSF47370, at 596443 to 598270 9928
Group Condition mRNA_1556 mRNA_1557 mRNA_1558 mRNA_1559 mRNA_1560
9924
9925
9926
9927
9928
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.5 -1.0   -3.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -2.0 0.2   -2.5
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 -0.5 -0.7   -2.2
ypd buoyancy 40 hrs High Buoyancy -0.7 0.3 0.3   -1.5
facs on lipid accumulation Sorted High BODIPY Gate -0.3 0.4 -0.8   -0.8
growth on oleic acid YNB Glucose -0.1 -0.4 -0.4   0.6
growth on ypd YPD 0.1 0.3 -0.0   -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.5 -0.3 0.2   -0.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 0.1 0.1   -0.3
ypd buoyancy 40 hrs Low Buoyancy 0.2 -0.0 0.7   -0.5
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.2 0.7   0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.5 -0.1 0.5   -0.2
growth on ricinoleic acid YNB Glucose -0.2 0.3 0.2   0.7
auxotrophy Dropout Complete 0.2 0.4 -0.0   0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 0.1 0.9   -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.6 0.1 0.5   0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 0.0 0.2   0.8
auxotrophy YNB Glucose 75mM Arginine 0.6 -0.2 -0.1   1.3
auxotrophy YNB Glucose 0.2 0.1 -0.1   1.5
growth on oleic acid YNB Oleic Acid -0.1 0.1 0.7   1.2
auxotrophy YNB Glucose 75mM Methionine 1.0 0.3 -0.2   1.7
remove
mRNA_1556
plot
remove
mRNA_1557
plot
remove
mRNA_1558
remove
mRNA_1559
plot
remove
mRNA_1560
plot