Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1552: 9920 - K03115 CSNK2B casein kinase II subunit beta, at 573433 to 575580 9920 mRNA_1553: 9921 - KOG1729 FYVE finger containing protein, at 575685 to 583746 9921 mRNA_1554: 9922 - KOG1611 Predicted short chain-type dehydrogenase, at 583831 to 584732 9922 mRNA_1555: 9923 - K18703 SUGCT succinate---hydroxymethylglutarate CoA-transferase, at 585061 to 586995 9923 mRNA_1556: 9924 - KOG3114 Uncharacterized conserved protein, at 587080 to 588305 9924
Group Condition mRNA_1552 mRNA_1553 mRNA_1554 mRNA_1555 mRNA_1556
9920
9921
9922
9923
9924
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.1 -0.6 -0.1 -0.7
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.2 -0.2 0.2 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.1 -0.2 -0.1 -0.3
ypd buoyancy 40 hrs Low Buoyancy 0.0 -0.1 -0.7 -0.1 0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 0.1 -0.4 0.2 -0.1
growth on oleic acid YNB Glucose -0.0 0.0 -0.3 0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.1 -0.4 0.4 -0.2
growth on ypd YPD -0.4 -0.0 -0.3 0.5 0.1
growth on oleic acid YNB Oleic Acid 0.5 -0.2 -0.3 -0.0 -0.1
auxotrophy Dropout Complete -0.3 -0.0 -0.2 0.2 0.2
growth on ricinoleic acid YNB Glucose -0.4 0.1 0.4 0.1 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.0 -0.1 0.0 0.5
auxotrophy YNB Glucose -0.4 -0.0 0.1 0.4 0.2
auxotrophy YNB Glucose 75mM Arginine -0.5 -0.0 -0.0 0.2 0.6
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.2 -0.3 0.2 1.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 0.6 0.1 0.0 0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.1 0.8 0.1 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.0 0.5 0.2 0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 0.1 0.4 0.4 0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.1 0.3 0.2 0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.4 -0.0 0.4 0.2 0.5
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