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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1547: 9915 - K14402 CPSF2, CFT2 cleavage and polyadenylation specificity factor subunit 2, at 562585 to 566021
9915
mRNA_1548: 9916 - K07937 ARF1 ADP-ribosylation factor 1, at 566553 to 567814
9916
mRNA_1549: 9917 - BLAST putative TspO/MBR family containing protein [Rhizocto..., at 568669 to 569316
9917
mRNA_1550: 9918 - HMMPfam-Methyltransferase domain-PF13489,SUPERFAMILY--SSF53335, at 569375 to 570862
9918
mRNA_1551: 9919 - HMMPfam-Ferritin-like domain-PF13668,SUPERFAMILY--SSF47240, at 571932 to 573047
9919
Group
Condition
mRNA_1547
mRNA_1548
mRNA_1549
mRNA_1550
mRNA_1551
9915
9916
9917
9918
9919
ypd buoyancy
40 hrs No Buoyancy Separation
-2.2
-0.4
0.4
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.7
-0.1
-0.5
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.0
0.0
-0.3
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
-0.0
-0.7
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
-0.1
0.2
-0.1
auxotrophy
YNB Glucose 75mM Methionine
0.0
0.4
-0.5
-0.3
auxotrophy
Dropout Complete
0.1
0.1
-0.2
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
-0.1
0.1
0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
0.2
0.3
-0.2
growth on oleic acid
YNB Oleic Acid
0.5
0.1
-0.1
-0.5
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.2
0.4
-0.2
growth on ypd
YPD
0.8
-0.6
0.1
-0.0
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.1
0.2
-0.0
auxotrophy
YNB Glucose
0.6
0.5
-0.6
-0.1
growth on ricinoleic acid
YNB Glucose
-0.1
0.2
0.5
-0.2
auxotrophy
YNB Glucose 75mM Arginine
0.5
0.5
-0.4
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.3
0.0
0.2
-0.1
growth on oleic acid
YNB Glucose
0.7
0.2
0.0
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.9
0.2
-0.5
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.7
0.2
0.1
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.6
0.3
0.4
-0.1
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