Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1517: 9885 - HMMPfam-Alternative oxidase-PF01786,PIRSF--PIRSF005229, at 494782 to 496298 9885 mRNA_1518: 9886 - K03521 fixA, etfB electron transfer flavoprotein beta subunit, at 496923 to 498027 9886 mRNA_1519: 9887 - K03434 PIGL N-acetylglucosaminylphosphatidylinositol deacetylase, at 498486 to 499593 9887 mRNA_1520: 9888 - K00765 hisG ATP phosphoribosyltransferase, at 499910 to 501221 9888 mRNA_1521: 9889 - HMMPfam-DNA polymerase delta, subunit 4-PF04081, at 501491 to 502163 9889
Group Condition mRNA_1517 mRNA_1518 mRNA_1519 mRNA_1520 mRNA_1521
9885
9886
9887
9888
9889
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -2.4 0.7    
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -2.0 0.2    
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -1.5 0.0    
growth on oleic acid YNB Oleic Acid -0.6 -1.6 0.8    
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -1.7 0.9    
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -1.2 -0.1    
growth on oleic acid YNB Glucose -0.1 -1.2 0.4    
facs on lipid accumulation Sorted No BODIPY Gate 0.3 -1.3 0.2    
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -1.2 0.5    
facs on lipid accumulation Sorted Low BODIPY Gate 0.3 -0.9 -0.0    
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.9 0.2    
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 0.6 -0.2    
growth on ricinoleic acid YNB Glucose 0.2 -0.7 0.4    
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.0 0.1    
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.1 0.1    
growth on ypd YPD 0.3 -0.0 0.0    
auxotrophy Dropout Complete 0.2 0.6 -0.0    
auxotrophy YNB Glucose 0.1 0.7 0.0    
auxotrophy YNB Glucose 75mM Arginine 0.3 0.2 0.4    
ypd buoyancy 40 hrs Low Buoyancy -0.2 0.9 0.5    
facs on lipid accumulation Sorted High BODIPY Gate 0.3 0.4 0.9    
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