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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1512: 9880 - BLAST proteophosphoglycan 5 [Moniliophthora roreri MCA ..., at 481811 to 485314
9880
mRNA_1513: 9881 - K13280 SEC11, sipW signal peptidase, endoplasmic reticulum-type, at 485460 to 486499
9881
mRNA_1514: 9882 - K07050 AARSD1, ALAX misacylated tRNA(Ala) deacylase, at 486604 to 488267
9882
mRNA_1515: 9883 - HMMPfam-Up-regulated During Septation-PF15456,SUPERFAMILY--SSF57997, at 488446 to 491742
9883
mRNA_1516: 9884 - BLAST transmembrane ATP-binding protein ABC transporter [Rh..., at 492148 to 493899
9884
Group
Condition
mRNA_1512
mRNA_1513
mRNA_1514
mRNA_1515
mRNA_1516
9880
9881
9882
9883
9884
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
-0.1
-0.8
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
0.1
-0.0
growth on ypd
YPD
-0.1
0.1
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
0.3
-0.0
growth on oleic acid
YNB Glucose
-0.1
-0.1
0.4
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.2
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
0.1
0.1
ypd buoyancy
40 hrs High Buoyancy
0.1
0.1
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.0
-0.0
0.3
auxotrophy
YNB Glucose 75mM Methionine
0.1
-0.2
0.5
ypd buoyancy
40 hrs Low Buoyancy
0.0
0.0
0.3
auxotrophy
Dropout Complete
0.1
-0.2
0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.3
0.9
growth on ricinoleic acid
YNB Glucose
0.1
-0.1
0.5
auxotrophy
YNB Glucose
0.1
-0.3
0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
0.4
0.1
auxotrophy
YNB Glucose 75mM Arginine
0.1
-0.1
0.6
growth on oleic acid
YNB Oleic Acid
-0.0
0.0
0.6
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
0.2
0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
0.1
0.8
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