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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1510: 9878 - KOG2695 WD40 repeat protein, at 476183 to 478334
9878
mRNA_1511: 9879 - KOG2136 Transcriptional regulators binding to the GC-rich sequences, at 478426 to 481591
9879
mRNA_1512: 9880 - BLAST proteophosphoglycan 5 [Moniliophthora roreri MCA ..., at 481811 to 485314
9880
mRNA_1513: 9881 - K13280 SEC11, sipW signal peptidase, endoplasmic reticulum-type, at 485460 to 486499
9881
mRNA_1514: 9882 - K07050 AARSD1, ALAX misacylated tRNA(Ala) deacylase, at 486604 to 488267
9882
Group
Condition
mRNA_1510
mRNA_1511
mRNA_1512
mRNA_1513
mRNA_1514
9878
9879
9880
9881
9882
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-1.2
-0.2
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.6
0.0
-0.4
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.6
-0.3
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.6
-0.2
0.0
0.2
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
-0.7
0.2
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.6
0.2
0.1
0.1
growth on oleic acid
YNB Oleic Acid
0.5
-0.7
-0.0
0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
0.0
-0.2
0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.3
-0.1
0.1
0.2
growth on oleic acid
YNB Glucose
0.5
-0.4
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
0.1
0.0
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
0.2
0.1
0.4
facs on lipid accumulation
Sorted High BODIPY Gate
0.3
-0.2
0.0
-0.0
auxotrophy
YNB Glucose 75mM Methionine
0.3
0.4
0.1
-0.2
growth on ricinoleic acid
YNB Glucose
0.4
0.2
0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
0.2
-0.1
0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.1
0.7
0.0
0.0
growth on ypd
YPD
0.0
0.9
-0.1
0.1
auxotrophy
YNB Glucose
0.5
0.7
0.1
-0.3
auxotrophy
Dropout Complete
0.8
0.5
0.1
-0.2
auxotrophy
YNB Glucose 75mM Arginine
0.3
1.0
0.1
-0.1
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