Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1510: 9878 - KOG2695 WD40 repeat protein, at 476183 to 478334 9878 mRNA_1511: 9879 - KOG2136 Transcriptional regulators binding to the GC-rich sequences, at 478426 to 481591 9879 mRNA_1512: 9880 - BLAST proteophosphoglycan 5 [Moniliophthora roreri MCA ..., at 481811 to 485314 9880 mRNA_1513: 9881 - K13280 SEC11, sipW signal peptidase, endoplasmic reticulum-type, at 485460 to 486499 9881 mRNA_1514: 9882 - K07050 AARSD1, ALAX misacylated tRNA(Ala) deacylase, at 486604 to 488267 9882
Group Condition mRNA_1510 mRNA_1511 mRNA_1512 mRNA_1513 mRNA_1514
9878
9879
9880
9881
9882
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -1.2 -0.2   -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 0.0 -0.4   -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.6 -0.3   0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.6 -0.2 0.0   0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 -0.7 0.2   -0.1
ypd buoyancy 40 hrs High Buoyancy -0.6 0.2 0.1   0.1
growth on oleic acid YNB Oleic Acid 0.5 -0.7 -0.0   0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 0.0 -0.2   0.1
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.1 0.1   0.2
growth on oleic acid YNB Glucose 0.5 -0.4 -0.1   -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 0.1 0.0   0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 0.2 0.1   0.4
facs on lipid accumulation Sorted High BODIPY Gate 0.3 -0.2 0.0   -0.0
auxotrophy YNB Glucose 75mM Methionine 0.3 0.4 0.1   -0.2
growth on ricinoleic acid YNB Glucose 0.4 0.2 0.1   -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.2 -0.1   0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.7 0.0   0.0
growth on ypd YPD 0.0 0.9 -0.1   0.1
auxotrophy YNB Glucose 0.5 0.7 0.1   -0.3
auxotrophy Dropout Complete 0.8 0.5 0.1   -0.2
auxotrophy YNB Glucose 75mM Arginine 0.3 1.0 0.1   -0.1
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