Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1507: 9875 - HMMPfam-Cupin domain-PF07883,SUPERFAMILY--SSF51182, at 469945 to 470941 9875 mRNA_1508: 9876 - KOG3140 Predicted membrane protein, at 471301 to 473619 9876 mRNA_1509: 9877 - KOG1471 Phosphatidylinositol transfer protein SEC14 and related proteins, at 474155 to 475425 9877 mRNA_1510: 9878 - KOG2695 WD40 repeat protein, at 476183 to 478334 9878 mRNA_1511: 9879 - KOG2136 Transcriptional regulators binding to the GC-rich sequences, at 478426 to 481591 9879
Group Condition mRNA_1507 mRNA_1508 mRNA_1509 mRNA_1510 mRNA_1511
9875
9876
9877
9878
9879
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.2 -0.1 -0.2 -1.2
growth on oleic acid YNB Glucose -0.3 -0.6 -0.4 0.5 -0.4
facs on lipid accumulation Sorted No BODIPY Gate 0.1 -0.3 -0.1 -0.6 -0.2
growth on oleic acid YNB Oleic Acid -0.2 -0.4 -0.1 0.5 -0.7
facs on lipid accumulation Sorted Low BODIPY Gate 0.0 -0.6 0.1 -0.5 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 0.6 -0.4 -0.2 -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 0.2 -0.4 -0.1 0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 0.9 -0.3 -0.6 0.0
growth on ypd YPD -0.1 -1.3 0.1 0.0 0.9
facs on lipid accumulation Sorted High BODIPY Gate 0.0 -0.3 -0.0 0.3 -0.2
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.2 0.2 -0.3 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 0.9 -0.5 -0.3 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 0.6 -0.7 0.1 0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 0.9 -0.2 0.1 -0.7
growth on ricinoleic acid YNB Glucose -0.3 0.4 -0.2 0.4 0.2
ypd buoyancy 40 hrs High Buoyancy 0.4 0.5 0.3 -0.6 0.2
auxotrophy YNB Glucose 75mM Methionine -0.4 0.7 0.1 0.3 0.4
auxotrophy YNB Glucose 75mM Arginine -0.4 0.4 -0.1 0.3 1.0
auxotrophy Dropout Complete -0.4 0.1 0.2 0.8 0.5
ypd buoyancy 40 hrs Low Buoyancy 0.2 0.5 0.1 -0.1 0.7
auxotrophy YNB Glucose -0.4 0.5 0.1 0.5 0.7
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