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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1505: 9873 - Hypothetical Protein, at 467466 to 468083
9873
mRNA_1506: 9874 - Hypothetical Protein, at 468569 to 469292
9874
mRNA_1507: 9875 - HMMPfam-Cupin domain-PF07883,SUPERFAMILY--SSF51182, at 469945 to 470941
9875
mRNA_1508: 9876 - KOG3140 Predicted membrane protein, at 471301 to 473619
9876
mRNA_1509: 9877 - KOG1471 Phosphatidylinositol transfer protein SEC14 and related proteins, at 474155 to 475425
9877
Group
Condition
mRNA_1505
mRNA_1506
mRNA_1507
mRNA_1508
mRNA_1509
9873
9874
9875
9876
9877
growth on ypd
YPD
-0.3
-0.1
-1.3
0.1
growth on oleic acid
YNB Glucose
-0.1
-0.3
-0.6
-0.4
growth on oleic acid
YNB Oleic Acid
-0.5
-0.2
-0.4
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.4
0.2
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.2
-0.2
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
0.1
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.5
-0.1
0.6
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
0.0
-0.6
0.1
auxotrophy
Dropout Complete
-0.3
-0.4
0.1
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.0
0.0
-0.3
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-0.4
0.4
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
0.0
0.6
-0.7
auxotrophy
YNB Glucose
-0.4
-0.4
0.5
0.1
growth on ricinoleic acid
YNB Glucose
-0.0
-0.3
0.4
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.4
-0.4
0.7
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
-0.5
0.9
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.0
0.9
-0.5
ypd buoyancy
40 hrs Median Buoyancy
-0.1
0.1
0.2
0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
0.3
0.9
-0.2
ypd buoyancy
40 hrs Low Buoyancy
0.0
0.2
0.5
0.1
ypd buoyancy
40 hrs High Buoyancy
0.0
0.4
0.5
0.3
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