Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1505: 9873 - Hypothetical Protein, at 467466 to 468083 9873 mRNA_1506: 9874 - Hypothetical Protein, at 468569 to 469292 9874 mRNA_1507: 9875 - HMMPfam-Cupin domain-PF07883,SUPERFAMILY--SSF51182, at 469945 to 470941 9875 mRNA_1508: 9876 - KOG3140 Predicted membrane protein, at 471301 to 473619 9876 mRNA_1509: 9877 - KOG1471 Phosphatidylinositol transfer protein SEC14 and related proteins, at 474155 to 475425 9877
Group Condition mRNA_1505 mRNA_1506 mRNA_1507 mRNA_1508 mRNA_1509
9873
9874
9875
9876
9877
growth on ypd YPD -0.3   -0.1 -1.3 0.1
growth on oleic acid YNB Glucose -0.1   -0.3 -0.6 -0.4
growth on oleic acid YNB Oleic Acid -0.5   -0.2 -0.4 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2   -0.4 0.2 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.2   -0.2 -0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2   0.1 -0.3 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5   -0.1 0.6 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate 0.2   0.0 -0.6 0.1
auxotrophy Dropout Complete -0.3   -0.4 0.1 0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.0   0.0 -0.3 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.2   -0.4 0.4 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2   0.0 0.6 -0.7
auxotrophy YNB Glucose -0.4   -0.4 0.5 0.1
growth on ricinoleic acid YNB Glucose -0.0   -0.3 0.4 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.4   -0.4 0.7 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1   -0.5 0.9 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1   -0.0 0.9 -0.5
ypd buoyancy 40 hrs Median Buoyancy -0.1   0.1 0.2 0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.3   0.3 0.9 -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.0   0.2 0.5 0.1
ypd buoyancy 40 hrs High Buoyancy 0.0   0.4 0.5 0.3
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