Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1497: 9865 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 450422 to 453504 9865 mRNA_1498: 9866 - K11129 NHP2, NOLA2 H/ACA ribonucleoprotein complex subunit 2, at 454122 to 455195 9866 mRNA_1499: 9867 - KOG1231 Proteins containing the FAD binding domain, at 455664 to 457570 9867 mRNA_1500: 9868 - K05770 TSPO, BZRP benzodiazapine receptor, at 458270 to 459039 9868 mRNA_1501: 9869 - Hypothetical Protein, at 459271 to 459744 9869
Group Condition mRNA_1497 mRNA_1498 mRNA_1499 mRNA_1500 mRNA_1501
9865
9866
9867
9868
9869
facs on lipid accumulation Sorted Low BODIPY Gate -0.1   0.3 -2.5 -0.2
growth on oleic acid YNB Oleic Acid 0.2   -0.1 -0.6 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.1   -0.0 -0.2 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3   -0.3 0.5 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.2   -0.2 0.4 -0.1
growth on ricinoleic acid YNB Glucose -0.1   -0.2 0.3 0.0
ypd buoyancy 40 hrs Low Buoyancy -0.1   -0.0 0.1 0.1
growth on oleic acid YNB Glucose 0.0   0.0 0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.2   0.2 -0.4 0.2
auxotrophy YNB Glucose -0.1   -0.2 0.4 0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.1   0.1 0.2 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.4   0.0 0.0 -0.1
auxotrophy Dropout Complete 0.0   -0.2 0.5 -0.0
facs on lipid accumulation Sorted High BODIPY Gate 0.5   0.3 -0.3 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.2   -0.1 0.6 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.0   0.1 0.2 0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.6   -0.4 0.3 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.4   -0.2 0.6 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0   0.1 1.0 -0.1
growth on ypd YPD 0.3   0.0 1.0 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.6   0.1 0.7 -0.1
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