Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1493: 9861 - KOG1981 SOK1 kinase belonging to the STE20/SPS1/GC kinase family, at 437821 to 440939 9861 mRNA_1494: 9862 - HMMPfam-Haloacid dehalogenase-like hydrolase-PF13419,SUPERFAMILY--SSF56784, at 443115 to 444117 9862 mRNA_1495: 9863 - Hypothetical Protein, at 444439 to 447391 9863 mRNA_1496: 9864 - HMMPfam-Major Facilitator Superfamily-PF07690,PRINTS-Tetracycline resistance protein TetB signature-PR01036,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 447917 to 450188 9864 mRNA_1497: 9865 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 450422 to 453504 9865
Group Condition mRNA_1493 mRNA_1494 mRNA_1495 mRNA_1496 mRNA_1497
9861
9862
9863
9864
9865
growth on oleic acid YNB Glucose -0.6 0.1 -0.3 0.2 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 0.5 -0.5 -0.1 -0.3
facs on lipid accumulation Sorted No BODIPY Gate 0.4 -0.7 -0.3 0.2 0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 0.2 -0.3 0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.3 0.1 0.2 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 0.1 0.3 -0.3 0.1
growth on ricinoleic acid YNB Glucose -0.2 0.4 0.1 -0.4 -0.1
growth on oleic acid YNB Oleic Acid -0.5 0.4 -0.3 0.1 0.2
auxotrophy Dropout Complete 0.2 0.1 -0.3 0.2 0.0
auxotrophy YNB Glucose 0.3 -0.0 -0.2 0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 -0.4 0.1 0.1 0.4
ypd buoyancy 40 hrs Median Buoyancy 0.3 0.4 -0.5 0.2 0.0
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -1.0 0.3 0.6 0.5
growth on ypd YPD 0.1 -0.1 0.1 0.3 0.3
ypd buoyancy 40 hrs Low Buoyancy 0.2 0.6 -0.0 0.0 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 1.3 -0.1 -0.9 0.6
facs on lipid accumulation Sorted Low BODIPY Gate 0.3 -0.3 0.6 0.6 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3 0.6 0.3 -0.0 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.7 -0.0 0.3 0.4
ypd buoyancy 40 hrs High Buoyancy 0.2 0.8 -0.2 0.5 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 0.6 0.5 -0.3 0.6
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