Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1492: 9860 - K12855 PRPF6, PRP6 pre-mRNA-processing factor 6, at 434341 to 437683 9860 mRNA_1493: 9861 - KOG1981 SOK1 kinase belonging to the STE20/SPS1/GC kinase family, at 437821 to 440939 9861 mRNA_1494: 9862 - HMMPfam-Haloacid dehalogenase-like hydrolase-PF13419,SUPERFAMILY--SSF56784, at 443115 to 444117 9862 mRNA_1495: 9863 - Hypothetical Protein, at 444439 to 447391 9863 mRNA_1496: 9864 - HMMPfam-Major Facilitator Superfamily-PF07690,PRINTS-Tetracycline resistance protein TetB signature-PR01036,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 447917 to 450188 9864
Group Condition mRNA_1492 mRNA_1493 mRNA_1494 mRNA_1495 mRNA_1496
9860
9861
9862
9863
9864
growth on oleic acid YNB Glucose   -0.6 0.1 -0.3 0.2
facs on lipid accumulation Sorted No BODIPY Gate   0.4 -0.7 -0.3 0.2
growth on ricinoleic acid YNB Ricinoleic Acid   -0.5 0.1 0.3 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.2 0.5 -0.5 -0.1
growth on oleic acid YNB Oleic Acid   -0.5 0.4 -0.3 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.0 -0.4 0.1 0.1
growth on ricinoleic acid YNB Glucose   -0.2 0.4 0.1 -0.4
auxotrophy YNB Glucose 75mM Methionine   -0.0 0.2 -0.3 0.1
auxotrophy YNB Glucose 75mM Arginine   0.1 -0.3 0.1 0.2
auxotrophy Dropout Complete   0.2 0.1 -0.3 0.2
facs on lipid accumulation Sorted High BODIPY Gate   0.1 -1.0 0.3 0.6
auxotrophy YNB Glucose   0.3 -0.0 -0.2 0.2
growth on ypd YPD   0.1 -0.1 0.1 0.3
ypd buoyancy 40 hrs No Buoyancy Separation   0.1 1.3 -0.1 -0.9
ypd buoyancy 40 hrs Median Buoyancy   0.3 0.4 -0.5 0.2
ypd buoyancy 40 hrs Low Buoyancy   0.2 0.6 -0.0 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.3 0.6 0.5 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.1 0.7 -0.0 0.3
facs on lipid accumulation Sorted Low BODIPY Gate   0.3 -0.3 0.6 0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.3 0.6 0.3 -0.0
ypd buoyancy 40 hrs High Buoyancy   0.2 0.8 -0.2 0.5
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