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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1490: 9858 - ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 429512 to 431122
9858
mRNA_1491: 9859 - K04513 RHOA Ras homolog gene family, member A, at 432599 to 433571
9859
mRNA_1492: 9860 - K12855 PRPF6, PRP6 pre-mRNA-processing factor 6, at 434341 to 437683
9860
mRNA_1493: 9861 - KOG1981 SOK1 kinase belonging to the STE20/SPS1/GC kinase family, at 437821 to 440939
9861
mRNA_1494: 9862 - HMMPfam-Haloacid dehalogenase-like hydrolase-PF13419,SUPERFAMILY--SSF56784, at 443115 to 444117
9862
Group
Condition
mRNA_1490
mRNA_1491
mRNA_1492
mRNA_1493
mRNA_1494
9858
9859
9860
9861
9862
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
-0.5
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
0.0
-0.4
growth on oleic acid
YNB Oleic Acid
-0.6
-0.5
0.4
growth on oleic acid
YNB Glucose
-0.1
-0.6
0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.4
0.1
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
0.3
0.1
-1.0
auxotrophy
YNB Glucose 75mM Methionine
-0.6
-0.0
0.2
growth on ypd
YPD
-0.3
0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
0.4
-0.7
auxotrophy
Dropout Complete
-0.5
0.2
0.1
auxotrophy
YNB Glucose
-0.3
0.3
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-0.2
0.5
growth on ricinoleic acid
YNB Glucose
-0.2
-0.2
0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
0.1
0.7
ypd buoyancy
40 hrs Low Buoyancy
-0.1
0.2
0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
0.7
0.3
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
0.3
0.6
ypd buoyancy
40 hrs Median Buoyancy
0.2
0.3
0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.0
0.3
0.6
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
0.1
1.3
ypd buoyancy
40 hrs High Buoyancy
0.4
0.2
0.8
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