Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1488: 9856 - K15371 GDH2 glutamate dehydrogenase, at 423330 to 427670 9856 mRNA_1489: 9857 - K09022 ridA, tdcF 2-iminobutanoate/2-iminopropanoate deaminase, at 428243 to 429095 9857 mRNA_1490: 9858 - ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 429512 to 431122 9858 mRNA_1491: 9859 - K04513 RHOA Ras homolog gene family, member A, at 432599 to 433571 9859 mRNA_1492: 9860 - K12855 PRPF6, PRP6 pre-mRNA-processing factor 6, at 434341 to 437683 9860
Group Condition mRNA_1488 mRNA_1489 mRNA_1490 mRNA_1491 mRNA_1492
9856
9857
9858
9859
9860
growth on oleic acid YNB Oleic Acid -0.6 0.0 -0.6    
facs on lipid accumulation Sorted No BODIPY Gate -0.6 -0.8 0.2    
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 -0.7 -0.5    
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 -0.2 -0.3    
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.9 0.3    
auxotrophy Dropout Complete -0.2 -0.3 -0.5    
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.2 -0.5    
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.3 -0.6    
auxotrophy YNB Glucose 75mM Arginine 0.0 -0.5 -0.4    
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.5 -0.2    
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.5 -0.1    
growth on oleic acid YNB Glucose -0.2 -0.3 -0.1    
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 -0.3 -0.3    
growth on ypd YPD -0.2 0.1 -0.3    
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -0.3 -0.1    
auxotrophy YNB Glucose 0.1 -0.1 -0.3    
growth on ricinoleic acid YNB Glucose -0.1 0.1 -0.2    
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.3 0.2    
ypd buoyancy 40 hrs High Buoyancy 0.0 -0.3 0.4    
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.3 0.0    
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.1 0.7    
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