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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1488: 9856 - K15371 GDH2 glutamate dehydrogenase, at 423330 to 427670
9856
mRNA_1489: 9857 - K09022 ridA, tdcF 2-iminobutanoate/2-iminopropanoate deaminase, at 428243 to 429095
9857
mRNA_1490: 9858 - ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 429512 to 431122
9858
mRNA_1491: 9859 - K04513 RHOA Ras homolog gene family, member A, at 432599 to 433571
9859
mRNA_1492: 9860 - K12855 PRPF6, PRP6 pre-mRNA-processing factor 6, at 434341 to 437683
9860
Group
Condition
mRNA_1488
mRNA_1489
mRNA_1490
mRNA_1491
mRNA_1492
9856
9857
9858
9859
9860
growth on oleic acid
YNB Oleic Acid
-0.6
0.0
-0.6
facs on lipid accumulation
Sorted No BODIPY Gate
-0.6
-0.8
0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
-0.7
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
-0.2
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
-0.9
0.3
auxotrophy
Dropout Complete
-0.2
-0.3
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.2
-0.5
auxotrophy
YNB Glucose 75mM Methionine
0.1
-0.3
-0.6
auxotrophy
YNB Glucose 75mM Arginine
0.0
-0.5
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.5
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.5
-0.1
growth on oleic acid
YNB Glucose
-0.2
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.0
-0.3
-0.3
growth on ypd
YPD
-0.2
0.1
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
-0.3
-0.1
auxotrophy
YNB Glucose
0.1
-0.1
-0.3
growth on ricinoleic acid
YNB Glucose
-0.1
0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.3
0.2
ypd buoyancy
40 hrs High Buoyancy
0.0
-0.3
0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
0.3
0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.1
0.7
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