Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1486: 9854 - K11085 msbA ATP-binding cassette, subfamily B, bacterial MsbA, at 414021 to 419409 9854 mRNA_1487: 9855 - K01883 CARS, cysS cysteinyl-tRNA synthetase, at 420051 to 423071 9855 mRNA_1488: 9856 - K15371 GDH2 glutamate dehydrogenase, at 423330 to 427670 9856 mRNA_1489: 9857 - K09022 ridA, tdcF 2-iminobutanoate/2-iminopropanoate deaminase, at 428243 to 429095 9857 mRNA_1490: 9858 - ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 429512 to 431122 9858
Group Condition mRNA_1486 mRNA_1487 mRNA_1488 mRNA_1489 mRNA_1490
9854
9855
9856
9857
9858
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -1.7 -0.1 -0.5 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 -0.7 0.1 -0.7 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.6 -0.4 -0.9 0.3
growth on oleic acid YNB Oleic Acid -0.0 0.1 -0.6 0.0 -0.6
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.4 -0.6 -0.8 0.2
auxotrophy Dropout Complete -0.2 0.6 -0.2 -0.3 -0.5
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.3 -0.0 -0.5 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 0.5 0.1 -0.3 -0.6
growth on ypd YPD 0.1 -0.2 -0.2 0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.0 0.1 -0.3 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 0.6 -0.2 -0.2 -0.5
growth on oleic acid YNB Glucose 0.1 0.1 -0.2 -0.3 -0.1
growth on ricinoleic acid YNB Glucose -0.0 -0.1 -0.1 0.1 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 0.3 0.0 -0.3 -0.3
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.1 -0.1 -0.3 0.2
auxotrophy YNB Glucose 75mM Arginine -0.1 0.8 0.0 -0.5 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 0.9 -0.5 -0.2 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 0.1 -0.3 -0.1 0.7
auxotrophy YNB Glucose -0.2 0.6 0.1 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.3 -0.1 0.3 0.0
ypd buoyancy 40 hrs High Buoyancy 0.1 0.4 0.0 -0.3 0.4
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