Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1483: 9851 - BLAST Protein priB [Grifola frondosa], at 409791 to 410399 9851 mRNA_1484: 9852 - HMMPfam-Cation efflux family-PF01545,SUPERFAMILY--SSF161111, at 410749 to 412587 9852 mRNA_1485: 9853 - HMMPfam-WW domain-PF00397,ProSitePatterns-WW/rsp5/WWP domain signature.-PS01159,ProSiteProfiles-WW/rsp5/WWP domain profile.-PS50020,SMART-Domain with 2 conserved Trp (W) residues-SM00456,SUPERFAMILY--SSF51045, at 412872 to 413936 9853 mRNA_1486: 9854 - K11085 msbA ATP-binding cassette, subfamily B, bacterial MsbA, at 414021 to 419409 9854 mRNA_1487: 9855 - K01883 CARS, cysS cysteinyl-tRNA synthetase, at 420051 to 423071 9855
Group Condition mRNA_1483 mRNA_1484 mRNA_1485 mRNA_1486 mRNA_1487
9851
9852
9853
9854
9855
ypd buoyancy 40 hrs No Buoyancy Separation -2.2 -0.3 -1.3 -0.1 -1.7
facs on lipid accumulation Sorted Low BODIPY Gate -2.4 -0.1 -0.3 -0.3 0.1
ypd buoyancy 40 hrs Low Buoyancy -2.7 0.2 0.1 -0.1 0.3
facs on lipid accumulation Sorted High BODIPY Gate -1.3 0.0 -0.1 -0.2 -0.6
auxotrophy YNB Glucose 75mM Methionine -2.3 0.4 -0.2 -0.1 0.5
facs on lipid accumulation Sorted No BODIPY Gate -1.3 -0.1 -0.7 -0.1 0.4
ypd buoyancy 40 hrs Median Buoyancy -1.3 -0.1 -0.1 0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine -2.8 0.5 0.2 -0.1 0.8
growth on oleic acid YNB Oleic Acid -2.0 0.3 0.3 -0.0 0.1
ypd buoyancy 40 hrs High Buoyancy -1.0 -0.3 -0.2 0.1 0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 -0.0 -0.2 0.0 -0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 0.2 -0.5 -0.1 -0.0
growth on ricinoleic acid YNB Glucose -1.3 0.7 0.5 -0.0 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -1.7 0.4 0.7 -0.1 0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 0.2 -0.1 -0.0 0.3
auxotrophy YNB Glucose -0.3 0.5 0.1 -0.2 0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy 1.2 -0.1 -0.8 0.1 0.3
auxotrophy Dropout Complete -0.4 0.8 -0.1 -0.2 0.6
growth on oleic acid YNB Glucose -0.1 0.5 0.1 0.1 0.1
growth on ypd YPD 1.1 0.4 -0.1 0.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 0.4 0.5 -0.0 0.9
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