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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1481: 9849 - Hypothetical Protein, at 404296 to 404872
9849
mRNA_1482: 9850 - BLAST zn -c6 transcription factor [Malassezia pachyderm..., at 409012 to 409512
9850
mRNA_1483: 9851 - BLAST Protein priB [Grifola frondosa], at 409791 to 410399
9851
mRNA_1484: 9852 - HMMPfam-Cation efflux family-PF01545,SUPERFAMILY--SSF161111, at 410749 to 412587
9852
mRNA_1485: 9853 - HMMPfam-WW domain-PF00397,ProSitePatterns-WW/rsp5/WWP domain signature.-PS01159,ProSiteProfiles-WW/rsp5/WWP domain profile.-PS50020,SMART-Domain with 2 conserved Trp (W) residues-SM00456,SUPERFAMILY--SSF51045, at 412872 to 413936
9853
Group
Condition
mRNA_1481
mRNA_1482
mRNA_1483
mRNA_1484
mRNA_1485
9849
9850
9851
9852
9853
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
-2.2
-0.3
-1.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-2.4
-0.1
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-1.3
-0.1
-0.7
ypd buoyancy
40 hrs Low Buoyancy
0.2
-2.7
0.2
0.1
auxotrophy
YNB Glucose 75mM Arginine
0.3
-2.8
0.5
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.4
-2.3
0.4
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-1.3
0.0
-0.1
growth on oleic acid
YNB Oleic Acid
-0.2
-2.0
0.3
0.3
ypd buoyancy
40 hrs Median Buoyancy
0.1
-1.3
-0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.1
-1.0
-0.3
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-1.7
0.4
0.7
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
0.0
0.2
-0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
0.1
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-0.1
0.2
-0.1
growth on ricinoleic acid
YNB Glucose
-0.0
-1.3
0.7
0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
1.2
-0.1
-0.8
growth on oleic acid
YNB Glucose
-0.1
-0.1
0.5
0.1
auxotrophy
Dropout Complete
0.2
-0.4
0.8
-0.1
auxotrophy
YNB Glucose
0.3
-0.3
0.5
0.1
growth on ypd
YPD
-0.4
1.1
0.4
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.0
0.1
0.4
0.5
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