Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1470: 9838 - K18592 GGT1_5, CD224 gamma-glutamyltranspeptidase / glutathione hydrolase / leukotriene-C4 hydrolase, at 368201 to 370453 9838 mRNA_1471: 9839 - K08874 TRRAP transformation/transcription domain-associated protein, at 370707 to 382935 9839 mRNA_1472: 9840 - HMMPfam-Zinc finger, C3HC4 type (RING finger)-PF00097,ProSitePatterns-Zinc finger RING-type signature.-PS00518,SMART-Ring finger-SM00184,SUPERFAMILY--SSF57850, at 383411 to 384622 9840 mRNA_1473: 9841 - KOG0254 Predicted transporter (major facilitator superfamily), at 385086 to 387836 9841 mRNA_1474: 9842 - Hypothetical Protein, at 388451 to 391356 9842
Group Condition mRNA_1470 mRNA_1471 mRNA_1472 mRNA_1473 mRNA_1474
9838
9839
9840
9841
9842
growth on oleic acid YNB Glucose 0.0 -3.0 -0.2 0.1 0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -2.6 -0.6 0.4 0.4
growth on oleic acid YNB Oleic Acid 0.2 -2.4 0.1 0.2 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -1.0 -0.6 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 -1.7 -0.4 -0.0 0.0
auxotrophy Dropout Complete 0.1 -2.2 0.1 0.0 0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.9 -3.1 -0.0 0.3 0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 -0.9 -0.1 -0.2 -0.2
auxotrophy YNB Glucose 75mM Arginine 0.4 -1.4 0.1 -0.0 0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -1.3 -0.0 0.8 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -1.2 0.1 0.7 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.7 -0.3 0.2 0.2 0.0
growth on ricinoleic acid YNB Glucose 0.0 -1.5 0.3 0.6 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.5 0.0 -0.1 -0.3 -0.3
ypd buoyancy 40 hrs High Buoyancy 0.3 -0.5 0.0 -0.1 0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.2 0.1 -0.4 0.3 0.2
ypd buoyancy 40 hrs Median Buoyancy 0.2 -0.5 0.2 0.1 0.1
auxotrophy YNB Glucose 0.1 0.1 -0.0 -0.1 0.2
growth on ypd YPD -0.5 0.8 0.4 -0.0 -0.4
ypd buoyancy 40 hrs Low Buoyancy 0.1 0.0 0.1 -0.0 0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 0.5 0.2 -0.1 0.1
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