Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_1465: 9833 - Hypothetical Protein, at 352394 to 352564 9833 mRNA_1466: 9834 - BLAST putative catalytic domain thiamin pyrophosphokinase [..., at 352655 to 354087 9834 mRNA_1467: 9835 - HMMPfam-Mannosyl oligosaccharide glucosidase-PF03200,SUPERFAMILY--SSF48208, at 354447 to 358959 9835 mRNA_1468: 9836 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 360687 to 364959 9836 mRNA_1469: 9837 - KOG1200 Mitochondrial/plastidial beta-ketoacyl-ACP reductase, at 366449 to 367493 9837
Group Condition mRNA_1465 mRNA_1466 mRNA_1467 mRNA_1468 mRNA_1469
9833
9834
9835
9836
9837
growth on ricinoleic acid YNB Ricinoleic Acid   -0.1 -3.3 -2.9  
growth on ricinoleic acid YNB Methylricinoleic Acid   0.1 -1.0 -3.4  
ypd buoyancy 40 hrs No Buoyancy Separation   -1.6 -0.9 -1.2  
growth on oleic acid YNB Oleic Acid   -0.9 -0.5 -1.4  
auxotrophy Dropout Complete   -0.5 -0.6 -1.2  
facs on lipid accumulation Sorted High BODIPY Gate   0.2 -0.5 -0.9  
facs on lipid accumulation Sorted No BODIPY Gate   -0.2 -0.6 -0.4  
auxotrophy YNB Glucose 75mM Methionine   -0.4 -0.3 -0.4  
auxotrophy YNB Glucose 75mM Arginine   -0.2 -0.1 -0.7  
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.3 -0.1 -0.7  
ypd buoyancy 40 hrs Median Buoyancy   0.1 -0.1 -0.5  
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.4 -0.4 -0.4  
auxotrophy YNB Glucose   0.0 -0.2 -0.2  
growth on ricinoleic acid YNB Glucose   0.0 0.0 -0.3  
growth on oleic acid YNB Glucose   -0.2 0.0 0.4  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.1 0.1 0.1  
facs on lipid accumulation Sorted Low BODIPY Gate   0.7 -0.4 -0.0  
growth on ypd YPD   0.2 -0.2 0.4  
ypd buoyancy 40 hrs High Buoyancy   0.1 0.3 0.1  
ypd buoyancy 40 hrs Low Buoyancy   0.3 0.5 -0.3  
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.8 0.2 -0.0  
remove
mRNA_1465
plot
remove
mRNA_1466
plot
remove
mRNA_1467
remove
mRNA_1468
plot
remove
mRNA_1469
plot