Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1464: 9832 - BLAST conidiation protein Con-6, putative [Aspergillus ..., at 351662 to 352112 9832 mRNA_1465: 9833 - Hypothetical Protein, at 352394 to 352564 9833 mRNA_1466: 9834 - BLAST putative catalytic domain thiamin pyrophosphokinase [..., at 352655 to 354087 9834 mRNA_1467: 9835 - HMMPfam-Mannosyl oligosaccharide glucosidase-PF03200,SUPERFAMILY--SSF48208, at 354447 to 358959 9835 mRNA_1468: 9836 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 360687 to 364959 9836
Group Condition mRNA_1464 mRNA_1465 mRNA_1466 mRNA_1467 mRNA_1468
9832
9833
9834
9835
9836
growth on ricinoleic acid YNB Ricinoleic Acid 0.4   -0.1 -3.3 -2.9
growth on ricinoleic acid YNB Methylricinoleic Acid 0.8   0.1 -1.0 -3.4
ypd buoyancy 40 hrs No Buoyancy Separation 0.6   -1.6 -0.9 -1.2
growth on oleic acid YNB Oleic Acid -0.2   -0.9 -0.5 -1.4
auxotrophy Dropout Complete 0.5   -0.5 -0.6 -1.2
auxotrophy YNB Glucose 75mM Methionine -0.3   -0.4 -0.3 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.3   -0.2 -0.1 -0.7
facs on lipid accumulation Sorted No BODIPY Gate 0.0   -0.2 -0.6 -0.4
facs on lipid accumulation Sorted High BODIPY Gate 0.2   0.2 -0.5 -0.9
auxotrophy YNB Glucose -0.1   0.0 -0.2 -0.2
growth on oleic acid YNB Glucose -0.5   -0.2 0.0 0.4
ypd buoyancy 40 hrs Median Buoyancy 0.3   0.1 -0.1 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3   0.3 -0.1 -0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2   0.1 0.1 0.1
growth on ricinoleic acid YNB Glucose 0.5   0.0 0.0 -0.3
growth on ypd YPD -0.0   0.2 -0.2 0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.8   0.4 -0.4 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.0   0.3 0.5 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate 0.6   0.7 -0.4 -0.0
ypd buoyancy 40 hrs High Buoyancy 0.9   0.1 0.3 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.5   0.8 0.2 -0.0
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