Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1457: 9825 - K00549 metE 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, at 336305 to 339274 9825 mRNA_1458: 9826 - K17775 MDM34, MMM2 mitochondrial distribution and morphology protein 34, at 339999 to 342727 9826 mRNA_1459: 9827 - HMMPfam-F-box-like-PF12937,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF52047,SUPERFAMILY--SSF81383, at 342894 to 344123 9827 mRNA_1460: 9828 - K06911 K06911 uncharacterized protein, at 344701 to 345995 9828 mRNA_1461: 9829 - K02503 HINT1, hinT, hit histidine triad (HIT) family protein, at 346696 to 347592 9829
Group Condition mRNA_1457 mRNA_1458 mRNA_1459 mRNA_1460 mRNA_1461
9825
9826
9827
9828
9829
buoyancy on lipid accumulation 40 hrs Median Buoyancy -2.2 0.2 -0.1 0.1 -1.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -2.2 -0.1 -0.1 -0.8 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -2.6 0.4 -0.3 0.2 -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.6 -0.3 -0.0 -0.0 -0.9
facs on lipid accumulation Sorted No BODIPY Gate -2.5 -0.4 -0.5 0.3 0.5
facs on lipid accumulation Sorted Low BODIPY Gate -2.6 -0.9 0.0 0.5 0.4
growth on ricinoleic acid YNB Glucose -2.8 -0.3 -0.1 0.2 0.6
auxotrophy YNB Glucose 75mM Arginine -1.9 0.1 0.0 0.2 -0.6
growth on oleic acid YNB Glucose -2.7 0.2 0.1 0.2 -0.0
auxotrophy YNB Glucose -2.3 0.5 -0.0 0.3 -0.5
growth on oleic acid YNB Oleic Acid -2.6 0.5 -0.1 0.4 0.1
facs on lipid accumulation Sorted High BODIPY Gate -1.8 -1.0 0.5 0.4 0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -2.4 -0.2 0.1 0.4 0.7
growth on ypd YPD -0.7 -0.6 -0.1 0.2 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -2.2 -0.5 -0.1 0.5 1.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.4 -0.1 0.2 0.0
auxotrophy Dropout Complete -0.7 0.3 -0.2 0.3 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.2 -0.0 -0.3 0.1
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.3 0.1 0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.2 -0.5 -0.1 -0.0 0.1
auxotrophy YNB Glucose 75mM Methionine 0.3 0.4 -0.1 0.1 -0.4
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