Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1451: 9819 - K11987 PTGS2, COX2 prostaglandin-endoperoxide synthase 2, at 321832 to 325764 9819 mRNA_1452: 9820 - K07241 nixA high-affinity nickel-transport protein, at 326244 to 328401 9820 mRNA_1453: 9821 - HMMPfam-G-patch domain-PF01585,ProSiteProfiles-G-patch domain profile.-PS50174,SMART-glycine rich nucleic binding domain-SM00443, at 328591 to 330027 9821 mRNA_1454: 9822 - K11390 CLYBL citrate lyase subunit beta-like protein, at 330186 to 331593 9822 mRNA_1455: 9823 - BLAST patatin-like phospholipase domain protein [Rhizoctoni..., at 331786 to 334001 9823
Group Condition mRNA_1451 mRNA_1452 mRNA_1453 mRNA_1454 mRNA_1455
9819
9820
9821
9822
9823
facs on lipid accumulation Sorted High BODIPY Gate 0.1 0.3 -1.0 -0.6 -0.1
growth on ypd YPD -0.0 -0.0 -0.2 -0.4 -0.2
growth on oleic acid YNB Glucose -0.1 -0.2 -0.0 -0.1 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.4 -0.7 -0.3 0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.9 0.1 0.1 0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 0.4 -0.4 0.4 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 -0.2 -0.0 -0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.4 0.3 -0.4 -0.7 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.6 -0.1 0.0 0.6
growth on ricinoleic acid YNB Ricinoleic Acid 0.0 0.2 -0.7 0.1 0.2
growth on ricinoleic acid YNB Glucose -0.1 -0.4 -0.0 0.3 0.3
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.4 0.1 0.3 0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.1 0.2 0.3 -0.1
growth on oleic acid YNB Oleic Acid 0.0 -0.0 -0.1 0.1 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.3 0.1 0.0 0.4
auxotrophy YNB Glucose 75mM Methionine -0.1 0.3 -0.4 0.7 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.1 -0.1 0.3 0.3
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1 -0.2 0.7 0.1
auxotrophy Dropout Complete -0.1 0.4 -0.1 0.5 -0.2
auxotrophy YNB Glucose -0.1 0.3 -0.3 0.7 0.1
ypd buoyancy 40 hrs High Buoyancy 0.1 0.0 0.5 0.5 -0.1
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