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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Number of genes on each side:
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1451: 9819 - K11987 PTGS2, COX2 prostaglandin-endoperoxide synthase 2, at 321832 to 325764
9819
mRNA_1452: 9820 - K07241 nixA high-affinity nickel-transport protein, at 326244 to 328401
9820
mRNA_1453: 9821 - HMMPfam-G-patch domain-PF01585,ProSiteProfiles-G-patch domain profile.-PS50174,SMART-glycine rich nucleic binding domain-SM00443, at 328591 to 330027
9821
mRNA_1454: 9822 - K11390 CLYBL citrate lyase subunit beta-like protein, at 330186 to 331593
9822
mRNA_1455: 9823 - BLAST patatin-like phospholipase domain protein [Rhizoctoni..., at 331786 to 334001
9823
Group
Condition
mRNA_1451
mRNA_1452
mRNA_1453
mRNA_1454
mRNA_1455
9819
9820
9821
9822
9823
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
0.3
-1.0
-0.6
-0.1
growth on ypd
YPD
-0.0
-0.0
-0.2
-0.4
-0.2
growth on oleic acid
YNB Glucose
-0.1
-0.2
-0.0
-0.1
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
-0.4
-0.7
-0.3
0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-0.9
0.1
0.1
0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
0.4
-0.4
0.4
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
-0.2
-0.0
-0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.4
0.3
-0.4
-0.7
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.6
-0.1
0.0
0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
0.0
0.2
-0.7
0.1
0.2
growth on ricinoleic acid
YNB Glucose
-0.1
-0.4
-0.0
0.3
0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.4
0.1
0.3
0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.1
0.2
0.3
-0.1
growth on oleic acid
YNB Oleic Acid
0.0
-0.0
-0.1
0.1
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.3
0.1
0.0
0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.1
0.3
-0.4
0.7
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
-0.1
-0.1
0.3
0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.1
-0.2
0.7
0.1
auxotrophy
Dropout Complete
-0.1
0.4
-0.1
0.5
-0.2
auxotrophy
YNB Glucose
-0.1
0.3
-0.3
0.7
0.1
ypd buoyancy
40 hrs High Buoyancy
0.1
0.0
0.5
0.5
-0.1
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