Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1448: 9816 - KOG4159 Predicted E3 ubiquitin ligase, at 313855 to 315152 9816 mRNA_1449: 9817 - K03325 TC.ACR3 arsenite transporter, ACR3 family, at 315530 to 317378 9817 mRNA_1450: 9818 - K20826 RPAP1 RNA polymerase II-associated protein 1, at 317721 to 321691 9818 mRNA_1451: 9819 - K11987 PTGS2, COX2 prostaglandin-endoperoxide synthase 2, at 321832 to 325764 9819 mRNA_1452: 9820 - K07241 nixA high-affinity nickel-transport protein, at 326244 to 328401 9820
Group Condition mRNA_1448 mRNA_1449 mRNA_1450 mRNA_1451 mRNA_1452
9816
9817
9818
9819
9820
facs on lipid accumulation Sorted High BODIPY Gate -0.9 -0.5 -2.3 0.1 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.4 -1.1 -0.3 -0.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6 -0.2 -0.2 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.1 -0.7 -0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.1 -0.8 -0.1 0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.1 -0.4 -0.3 0.4
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.5 0.0 -0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.0 -0.3 -0.6 0.0 0.2
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 0.1 -0.2 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.0 0.0 -0.5 -0.1 -0.1
growth on oleic acid YNB Glucose 0.2 -0.2 -0.3 -0.1 -0.2
growth on ypd YPD -0.2 -0.1 0.0 -0.0 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.2 -0.1 0.1 0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 0.3 -0.6 0.1 -0.2
auxotrophy Dropout Complete 0.1 0.1 -0.7 -0.1 0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.2 1.0 -0.1 -0.6
auxotrophy YNB Glucose -0.1 0.0 -0.1 -0.1 0.3
growth on oleic acid YNB Oleic Acid 0.3 -0.3 0.2 0.0 -0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.1 -0.3 -0.1 0.4 0.3
growth on ricinoleic acid YNB Glucose 0.3 -0.1 0.8 -0.1 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate 3.6 -0.8 -1.5 0.1 -0.4
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