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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1447: 9815 - ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044, at 307275 to 311482
9815
mRNA_1448: 9816 - KOG4159 Predicted E3 ubiquitin ligase, at 313855 to 315152
9816
mRNA_1449: 9817 - K03325 TC.ACR3 arsenite transporter, ACR3 family, at 315530 to 317378
9817
mRNA_1450: 9818 - K20826 RPAP1 RNA polymerase II-associated protein 1, at 317721 to 321691
9818
mRNA_1451: 9819 - K11987 PTGS2, COX2 prostaglandin-endoperoxide synthase 2, at 321832 to 325764
9819
Group
Condition
mRNA_1447
mRNA_1448
mRNA_1449
mRNA_1450
mRNA_1451
9815
9816
9817
9818
9819
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-0.9
-0.5
-2.3
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.1
-0.4
-1.1
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.3
-0.1
-0.8
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.6
-0.2
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.3
-0.1
-0.7
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.3
-0.1
-0.4
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
0.0
-0.3
-0.6
0.0
auxotrophy
Dropout Complete
-0.1
0.1
0.1
-0.7
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-0.0
0.0
-0.5
-0.1
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.0
-0.5
0.0
-0.2
growth on oleic acid
YNB Glucose
-0.0
0.2
-0.2
-0.3
-0.1
auxotrophy
YNB Glucose
-0.2
-0.1
0.0
-0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.1
-0.2
-0.1
0.1
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.0
-0.1
0.1
-0.2
growth on ypd
YPD
0.2
-0.2
-0.1
0.0
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
0.2
0.3
-0.6
0.1
growth on oleic acid
YNB Oleic Acid
-0.1
0.3
-0.3
0.2
0.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
0.1
-0.3
-0.1
0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
-0.0
-0.2
1.0
-0.1
growth on ricinoleic acid
YNB Glucose
0.2
0.3
-0.1
0.8
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
3.6
-0.8
-1.5
0.1
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