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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1443: 9811 - Hypothetical Protein, at 292058 to 293115
9811
mRNA_1444: 9812 - KOG4173 Alpha-SNAP protein, at 294219 to 295156
9812
mRNA_1445: 9813 - K20045 ITSN intersectin, at 295295 to 301799
9813
mRNA_1446: 9814 - BLAST Mucin-17 [Rhizoctonia solani], at 303145 to 306587
9814
mRNA_1447: 9815 - ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044, at 307275 to 311482
9815
Group
Condition
mRNA_1443
mRNA_1444
mRNA_1445
mRNA_1446
mRNA_1447
9811
9812
9813
9814
9815
growth on ricinoleic acid
YNB Ricinoleic Acid
0.0
-1.4
-0.0
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.7
0.2
-0.1
auxotrophy
YNB Glucose 75mM Arginine
0.1
0.0
0.0
-0.2
ypd buoyancy
40 hrs High Buoyancy
0.1
-0.1
-0.1
-0.0
ypd buoyancy
40 hrs Median Buoyancy
0.2
-0.2
-0.1
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
0.2
-0.3
0.2
ypd buoyancy
40 hrs Low Buoyancy
0.3
0.0
-0.1
0.1
growth on oleic acid
YNB Oleic Acid
0.2
-0.1
0.2
-0.1
growth on oleic acid
YNB Glucose
0.2
-0.1
0.2
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
0.4
0.2
-0.1
auxotrophy
Dropout Complete
0.2
0.3
0.0
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.0
0.1
0.3
-0.0
auxotrophy
YNB Glucose 75mM Methionine
0.1
0.7
-0.0
-0.2
growth on ypd
YPD
0.4
0.0
-0.1
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
0.6
0.1
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
0.8
-0.3
0.1
growth on ricinoleic acid
YNB Glucose
0.1
0.3
0.2
0.2
auxotrophy
YNB Glucose
0.1
0.6
0.2
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.0
0.6
0.3
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
0.5
0.4
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
0.5
0.4
-0.1
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