Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1418: 9786 - HMMPfam-Fungal protein of unknown function (DUF1748)-PF08520, at 229007 to 229464 9786 mRNA_1419: 9787 - HMMPfam-PH domain-PF00169,ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF50729, at 229918 to 235537 9787 mRNA_1420: 9788 - KOG4269 Rac GTPase-activating protein BCR/ABR, at 236131 to 238616 9788 mRNA_1421: 9789 - K06950 K06950 uncharacterized protein, at 239485 to 240342 9789 mRNA_1422: 9790 - K12236 NFX1 transcriptional repressor NF-X1, at 240937 to 244730 9790
Group Condition mRNA_1418 mRNA_1419 mRNA_1420 mRNA_1421 mRNA_1422
9786
9787
9788
9789
9790
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 -0.3 -0.5 -1.6 -0.6
facs on lipid accumulation Sorted High BODIPY Gate -1.7 0.1 0.5 -0.5 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -1.2 -0.1 0.4 -0.5 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.8 0.0 -0.2 -0.3 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.0 -0.1 -0.7 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.1 0.1 0.0 -0.3 0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 0.0 0.4 -0.9 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.7 0.1 -0.1 -0.4 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 0.0 -0.4 -0.5 0.1
auxotrophy YNB Glucose 75mM Methionine 0.1 0.2 0.1 -1.3 0.2
growth on ricinoleic acid YNB Glucose 0.1 -0.0 0.2 -0.5 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 -0.0 -0.4 -0.2 0.1
growth on oleic acid YNB Glucose 0.2 -0.1 -0.0 -0.2 -0.2
growth on oleic acid YNB Oleic Acid 0.3 -0.0 -0.2 -0.1 -0.2
auxotrophy Dropout Complete 0.7 -0.0 -0.0 -1.0 0.3
growth on ypd YPD 0.1 -0.1 0.2 -0.2 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.3 0.2 -0.1 0.3 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.0 0.0 -0.0 -0.3 0.3
auxotrophy YNB Glucose 0.2 0.1 0.2 -0.4 0.2
ypd buoyancy 40 hrs High Buoyancy 0.2 0.3 0.1 1.0 -0.2
ypd buoyancy 40 hrs Median Buoyancy 0.6 0.3 0.3 0.7 0.1
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