Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1416: 9784 - BLAST amino-acid permease [Pseudozyma hubeiensis SY62], at 224768 to 225675 9784 mRNA_1417: 9785 - K01567 pdaA peptidoglycan-N-acetylmuramic acid deacetylase, at 227247 to 228373 9785 mRNA_1418: 9786 - HMMPfam-Fungal protein of unknown function (DUF1748)-PF08520, at 229007 to 229464 9786 mRNA_1419: 9787 - HMMPfam-PH domain-PF00169,ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF50729, at 229918 to 235537 9787 mRNA_1420: 9788 - KOG4269 Rac GTPase-activating protein BCR/ABR, at 236131 to 238616 9788
Group Condition mRNA_1416 mRNA_1417 mRNA_1418 mRNA_1419 mRNA_1420
9784
9785
9786
9787
9788
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 -0.4 -1.1 0.1 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 -0.5 0.0 0.0 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6 0.1 -0.7 0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -0.6 -1.2 -0.1 0.4
growth on ricinoleic acid YNB Ricinoleic Acid 0.6 -0.3 -0.7 -0.3 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 0.3 -0.8 0.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.6 0.1 -0.3 0.2 -0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.6 0.2 -1.7 0.1 0.5
growth on oleic acid YNB Glucose -0.2 -0.3 0.2 -0.1 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 0.3 0.2 -0.0 -0.4
growth on ypd YPD -0.7 0.3 0.1 -0.1 0.2
auxotrophy YNB Glucose -0.2 -0.6 0.2 0.1 0.2
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1 -0.0 0.0 -0.0
growth on oleic acid YNB Oleic Acid -0.3 0.2 0.3 -0.0 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.3 0.1 0.2 0.3 0.1
auxotrophy Dropout Complete 0.0 -0.3 0.7 -0.0 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 0.5 -0.6 0.0 0.4
auxotrophy YNB Glucose 75mM Methionine 0.3 0.1 0.1 0.2 0.1
growth on ricinoleic acid YNB Glucose 0.5 0.2 0.1 -0.0 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.6 0.8 -0.3 -0.0 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.4 0.5 0.6 0.3 0.3
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