Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1413: 9781 - KOG1711 Mitochondrial/chloroplast ribosomal protein L22, at 213856 to 214954 9781 mRNA_1414: 9782 - K19801 PI4KB phosphatidylinositol 4-kinase B, at 215225 to 219858 9782 mRNA_1415: 9783 - Hypothetical Protein, at 220710 to 221651 9783 mRNA_1416: 9784 - BLAST amino-acid permease [Pseudozyma hubeiensis SY62], at 224768 to 225675 9784 mRNA_1417: 9785 - K01567 pdaA peptidoglycan-N-acetylmuramic acid deacetylase, at 227247 to 228373 9785
Group Condition mRNA_1413 mRNA_1414 mRNA_1415 mRNA_1416 mRNA_1417
9781
9782
9783
9784
9785
buoyancy on lipid accumulation 40 hrs Low Buoyancy     -0.0 -0.6 -0.4
ypd buoyancy 40 hrs Low Buoyancy     -0.4 -0.6 0.1
ypd buoyancy 40 hrs No Buoyancy Separation     -0.7 -0.4 0.3
ypd buoyancy 40 hrs High Buoyancy     -0.5 -0.3 0.1
facs on lipid accumulation Sorted No BODIPY Gate     -0.4 0.2 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation     0.6 -0.6 -0.5
growth on ypd YPD     -0.1 -0.7 0.3
facs on lipid accumulation Sorted Low BODIPY Gate     -0.8 0.1 0.5
auxotrophy YNB Glucose     0.7 -0.2 -0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy     0.6 -0.6 0.1
ypd buoyancy 40 hrs Median Buoyancy     -0.0 -0.4 0.5
growth on oleic acid YNB Glucose     0.7 -0.2 -0.3
auxotrophy Dropout Complete     0.7 0.0 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy     0.4 -0.2 0.3
facs on lipid accumulation Sorted High BODIPY Gate     -0.3 0.6 0.2
auxotrophy YNB Glucose 75mM Arginine     0.7 -0.1 -0.1
growth on oleic acid YNB Oleic Acid     1.1 -0.3 0.2
auxotrophy YNB Glucose 75mM Methionine     0.6 0.3 0.1
growth on ricinoleic acid YNB Ricinoleic Acid     1.0 0.6 -0.3
growth on ricinoleic acid YNB Glucose     0.7 0.5 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid     1.2 0.6 0.8
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