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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1413: 9781 - KOG1711 Mitochondrial/chloroplast ribosomal protein L22, at 213856 to 214954
9781
mRNA_1414: 9782 - K19801 PI4KB phosphatidylinositol 4-kinase B, at 215225 to 219858
9782
mRNA_1415: 9783 - Hypothetical Protein, at 220710 to 221651
9783
mRNA_1416: 9784 - BLAST amino-acid permease [Pseudozyma hubeiensis SY62], at 224768 to 225675
9784
mRNA_1417: 9785 - K01567 pdaA peptidoglycan-N-acetylmuramic acid deacetylase, at 227247 to 228373
9785
Group
Condition
mRNA_1413
mRNA_1414
mRNA_1415
mRNA_1416
mRNA_1417
9781
9782
9783
9784
9785
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.6
-0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.4
-0.6
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
-0.4
0.3
ypd buoyancy
40 hrs High Buoyancy
-0.5
-0.3
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
0.2
-0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.6
-0.6
-0.5
growth on ypd
YPD
-0.1
-0.7
0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.8
0.1
0.5
auxotrophy
YNB Glucose
0.7
-0.2
-0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.6
-0.6
0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.4
0.5
growth on oleic acid
YNB Glucose
0.7
-0.2
-0.3
auxotrophy
Dropout Complete
0.7
0.0
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.4
-0.2
0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
0.6
0.2
auxotrophy
YNB Glucose 75mM Arginine
0.7
-0.1
-0.1
growth on oleic acid
YNB Oleic Acid
1.1
-0.3
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.6
0.3
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
1.0
0.6
-0.3
growth on ricinoleic acid
YNB Glucose
0.7
0.5
0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
1.2
0.6
0.8
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