Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1412: 9780 - K11699 RDR, RDRP RNA-dependent RNA polymerase, at 206910 to 211871 9780 mRNA_1413: 9781 - KOG1711 Mitochondrial/chloroplast ribosomal protein L22, at 213856 to 214954 9781 mRNA_1414: 9782 - K19801 PI4KB phosphatidylinositol 4-kinase B, at 215225 to 219858 9782 mRNA_1415: 9783 - Hypothetical Protein, at 220710 to 221651 9783 mRNA_1416: 9784 - BLAST amino-acid permease [Pseudozyma hubeiensis SY62], at 224768 to 225675 9784
Group Condition mRNA_1412 mRNA_1413 mRNA_1414 mRNA_1415 mRNA_1416
9780
9781
9782
9783
9784
ypd buoyancy 40 hrs No Buoyancy Separation -0.1     -0.7 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.2     -0.4 -0.6
ypd buoyancy 40 hrs High Buoyancy -0.2     -0.5 -0.3
growth on ypd YPD 0.1     -0.1 -0.7
facs on lipid accumulation Sorted Low BODIPY Gate -0.0     -0.8 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1     -0.0 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1     -0.0 -0.6
facs on lipid accumulation Sorted No BODIPY Gate -0.3     -0.4 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2     0.6 -0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1     0.6 -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1     0.4 -0.2
growth on oleic acid YNB Glucose -0.1     0.7 -0.2
auxotrophy YNB Glucose -0.1     0.7 -0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.3     -0.3 0.6
auxotrophy YNB Glucose 75mM Arginine 0.0     0.7 -0.1
growth on oleic acid YNB Oleic Acid -0.0     1.1 -0.3
auxotrophy Dropout Complete 0.1     0.7 0.0
auxotrophy YNB Glucose 75mM Methionine 0.0     0.6 0.3
growth on ricinoleic acid YNB Glucose 0.2     0.7 0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1     1.2 0.6
growth on ricinoleic acid YNB Ricinoleic Acid 0.3     1.0 0.6
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