Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_1390: 9758 - KOG0988 RNA-directed RNA polymerase QDE-1 required for posttranscriptional gene silencing and RNA interference, at 156559 to 159898 9758 mRNA_1391: 9759 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 160091 to 161111 9759 mRNA_1392: 9760 - HMMPfam-DASH complex subunit Dam1-PF08653, at 161776 to 163110 9760 mRNA_1393: 9761 - Hypothetical Protein, at 163263 to 164488 9761 mRNA_1394: 9762 - K04907 KCNH4 potassium voltage-gated channel Eag-related subfamily H member 4, at 164501 to 165028 9762
Group Condition mRNA_1390 mRNA_1391 mRNA_1392 mRNA_1393 mRNA_1394
9758
9759
9760
9761
9762
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.4 -0.8 0.1 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.3 -0.4 -0.7 0.4
growth on oleic acid YNB Glucose -0.3 0.1 0.1 -0.5 0.2
growth on oleic acid YNB Oleic Acid -0.1 0.1 0.3 -0.9 0.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.2 0.0 -1.2 0.7
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.8 -0.0 -0.2 0.8
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.1 -0.7 0.0 0.6
ypd buoyancy 40 hrs High Buoyancy 0.1 0.2 -0.3 0.4 -0.5
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1 0.4 -0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy 0.2 -0.0 -0.2 -0.5 0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -1.8 0.3 1.4 0.4
auxotrophy YNB Glucose 0.3 -0.1 -0.2 0.0 0.6
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 -0.3 0.1 0.3 0.5
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.2 -0.0 0.1 0.5
growth on ricinoleic acid YNB Glucose 0.1 -0.2 -0.5 1.2 0.5
growth on ypd YPD 0.1 0.5 0.1 -0.1 0.6
auxotrophy Dropout Complete -0.0 0.2 0.1 0.6 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 -1.0 0.0 1.7 0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.5 -0.2 1.4 0.8
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 -0.2 -0.3 1.6 0.6
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 -0.4 1.3 0.2 0.8
remove
mRNA_1390
plot
remove
mRNA_1391
plot
remove
mRNA_1392
remove
mRNA_1393
plot
remove
mRNA_1394
plot