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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1390: 9758 - KOG0988 RNA-directed RNA polymerase QDE-1 required for posttranscriptional gene silencing and RNA interference, at 156559 to 159898
9758
mRNA_1391: 9759 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 160091 to 161111
9759
mRNA_1392: 9760 - HMMPfam-DASH complex subunit Dam1-PF08653, at 161776 to 163110
9760
mRNA_1393: 9761 - Hypothetical Protein, at 163263 to 164488
9761
mRNA_1394: 9762 - K04907 KCNH4 potassium voltage-gated channel Eag-related subfamily H member 4, at 164501 to 165028
9762
Group
Condition
mRNA_1390
mRNA_1391
mRNA_1392
mRNA_1393
mRNA_1394
9758
9759
9760
9761
9762
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-0.4
-0.8
0.1
-0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.3
-0.4
-0.7
0.4
growth on oleic acid
YNB Glucose
-0.3
0.1
0.1
-0.5
0.2
growth on oleic acid
YNB Oleic Acid
-0.1
0.1
0.3
-0.9
0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
0.2
0.0
-1.2
0.7
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.8
-0.0
-0.2
0.8
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
0.1
-0.7
0.0
0.6
ypd buoyancy
40 hrs High Buoyancy
0.1
0.2
-0.3
0.4
-0.5
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.1
0.4
-0.2
-0.1
ypd buoyancy
40 hrs Low Buoyancy
0.2
-0.0
-0.2
-0.5
0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-1.8
0.3
1.4
0.4
auxotrophy
YNB Glucose
0.3
-0.1
-0.2
0.0
0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.0
-0.3
0.1
0.3
0.5
ypd buoyancy
40 hrs Median Buoyancy
0.2
0.2
-0.0
0.1
0.5
growth on ricinoleic acid
YNB Glucose
0.1
-0.2
-0.5
1.2
0.5
growth on ypd
YPD
0.1
0.5
0.1
-0.1
0.6
auxotrophy
Dropout Complete
-0.0
0.2
0.1
0.6
0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
-1.0
0.0
1.7
0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
-0.5
-0.2
1.4
0.8
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
-0.2
-0.3
1.6
0.6
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
-0.4
1.3
0.2
0.8
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