Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1375: 9743 - K08139 HXT MFS transporter, SP family, sugar-H+ symporter, at 123978 to 126769 9743 mRNA_1376: 9744 - HMMPfam-Helix-loop-helix DNA-binding domain-PF00010,ProSiteProfiles-Myc-type, basic helix-loop-helix (bHLH) domain profile.-PS50888,SUPERFAMILY--SSF47459, at 127099 to 128886 9744 mRNA_1377: 9745 - Hypothetical Protein, at 129264 to 129958 9745 mRNA_1378: 9746 - KOG2214 Predicted esterase of the alpha-beta hydrolase superfamily, at 130369 to 133964 9746 mRNA_1379: 9747 - HMMPfam-Ubiquitin-2 like Rad60 SUMO-like-PF11976,SUPERFAMILY--SSF54236, at 134077 to 136225 9747
Group Condition mRNA_1375 mRNA_1376 mRNA_1377 mRNA_1378 mRNA_1379
9743
9744
9745
9746
9747
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -1.2 0.1 -0.0 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.2 -0.5 -0.2 -0.1
growth on oleic acid YNB Oleic Acid -0.3 -1.2 0.2 0.2 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.2 -0.1 -0.0 -0.3
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.2 -0.3 0.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.0 -0.0 -0.6 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -0.2 -0.1 0.1 -0.3
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.3 0.3 -0.2 0.0
ypd buoyancy 40 hrs High Buoyancy -0.1 0.1 -0.1 -0.1 0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.2 0.5 -0.5 0.2 -0.4
auxotrophy YNB Glucose 0.0 0.1 -0.3 0.1 -0.0
growth on oleic acid YNB Glucose -0.2 -0.1 0.3 0.0 0.1
auxotrophy YNB Glucose 75mM Arginine 0.2 0.0 -0.1 0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.1 0.1 -0.2 0.2
growth on ypd YPD 0.2 0.1 -0.0 0.0 -0.0
auxotrophy Dropout Complete 0.0 0.3 -0.3 0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 -0.1 0.1 0.2 0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.5 0.6 -0.0 0.5
growth on ricinoleic acid YNB Ricinoleic Acid 0.4 -0.0 -0.0 0.0 0.2
growth on ricinoleic acid YNB Glucose 0.2 0.0 -0.0 0.4 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 0.0 0.2 0.3 -0.1
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