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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1375: 9743 - K08139 HXT MFS transporter, SP family, sugar-H+ symporter, at 123978 to 126769
9743
mRNA_1376: 9744 - HMMPfam-Helix-loop-helix DNA-binding domain-PF00010,ProSiteProfiles-Myc-type, basic helix-loop-helix (bHLH) domain profile.-PS50888,SUPERFAMILY--SSF47459, at 127099 to 128886
9744
mRNA_1377: 9745 - Hypothetical Protein, at 129264 to 129958
9745
mRNA_1378: 9746 - KOG2214 Predicted esterase of the alpha-beta hydrolase superfamily, at 130369 to 133964
9746
mRNA_1379: 9747 - HMMPfam-Ubiquitin-2 like Rad60 SUMO-like-PF11976,SUPERFAMILY--SSF54236, at 134077 to 136225
9747
Group
Condition
mRNA_1375
mRNA_1376
mRNA_1377
mRNA_1378
mRNA_1379
9743
9744
9745
9746
9747
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-1.2
0.1
-0.0
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.2
-0.5
-0.2
-0.1
growth on oleic acid
YNB Oleic Acid
-0.3
-1.2
0.2
0.2
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.2
-0.1
-0.0
-0.3
auxotrophy
YNB Glucose 75mM Methionine
0.1
-0.2
-0.3
0.1
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.0
-0.0
-0.6
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
-0.2
-0.1
0.1
-0.3
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.3
0.3
-0.2
0.0
ypd buoyancy
40 hrs High Buoyancy
-0.1
0.1
-0.1
-0.1
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
0.5
-0.5
0.2
-0.4
auxotrophy
YNB Glucose
0.0
0.1
-0.3
0.1
-0.0
growth on oleic acid
YNB Glucose
-0.2
-0.1
0.3
0.0
0.1
auxotrophy
YNB Glucose 75mM Arginine
0.2
0.0
-0.1
0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.0
0.1
0.1
-0.2
0.2
growth on ypd
YPD
0.2
0.1
-0.0
0.0
-0.0
auxotrophy
Dropout Complete
0.0
0.3
-0.3
0.2
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.0
-0.1
0.1
0.2
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.5
0.6
-0.0
0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
0.4
-0.0
-0.0
0.0
0.2
growth on ricinoleic acid
YNB Glucose
0.2
0.0
-0.0
0.4
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.4
0.0
0.2
0.3
-0.1
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