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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1372: 9740 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 115782 to 116339
9740
mRNA_1373: 9741 - K05661 ABCB6 ATP-binding cassette, subfamily B (MDR/TAP), member 6, at 116754 to 120065
9741
mRNA_1374: 9742 - K01733 thrC threonine synthase, at 121119 to 123367
9742
mRNA_1375: 9743 - K08139 HXT MFS transporter, SP family, sugar-H+ symporter, at 123978 to 126769
9743
mRNA_1376: 9744 - HMMPfam-Helix-loop-helix DNA-binding domain-PF00010,ProSiteProfiles-Myc-type, basic helix-loop-helix (bHLH) domain profile.-PS50888,SUPERFAMILY--SSF47459, at 127099 to 128886
9744
Group
Condition
mRNA_1372
mRNA_1373
mRNA_1374
mRNA_1375
mRNA_1376
9740
9741
9742
9743
9744
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
-0.1
-0.2
-1.2
growth on oleic acid
YNB Oleic Acid
-0.3
-0.1
-0.3
-1.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.2
-0.2
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
0.2
-0.3
-0.5
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.1
0.1
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
-0.1
-0.2
-0.2
growth on oleic acid
YNB Glucose
0.1
-0.0
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.0
-0.3
0.0
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
0.1
0.1
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
0.1
-0.1
0.1
growth on ypd
YPD
-0.4
0.3
0.2
0.1
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.1
-0.0
0.1
auxotrophy
YNB Glucose 75mM Methionine
0.4
-0.1
0.1
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.5
-0.1
-0.1
-0.0
growth on ricinoleic acid
YNB Glucose
0.2
0.0
0.2
0.0
auxotrophy
Dropout Complete
0.3
-0.1
0.0
0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
0.0
0.2
0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
0.4
-0.1
0.4
-0.0
auxotrophy
YNB Glucose
0.5
0.0
0.0
0.1
auxotrophy
YNB Glucose 75mM Arginine
0.6
-0.0
0.2
0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.7
0.2
0.4
0.0
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