Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1368: 9736 - K03233 EEF1G elongation factor 1-gamma, at 109072 to 110968 9736 mRNA_1369: 9737 - HMMPfam-Glutathione S-transferase, N-terminal domain-PF13417,ProSiteProfiles-Soluble glutathione S-transferase N-terminal domain profile.-PS50404,ProSiteProfiles-Soluble glutathione S-transferase C-terminal domain profile.-PS50405,SUPERFAMILY--SSF52833, at 111145 to 112135 9737 mRNA_1370: 9738 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 112389 to 113571 9738 mRNA_1371: 9739 - KOG3024 Uncharacterized conserved protein, at 114058 to 115447 9739 mRNA_1372: 9740 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 115782 to 116339 9740
Group Condition mRNA_1368 mRNA_1369 mRNA_1370 mRNA_1371 mRNA_1372
9736
9737
9738
9739
9740
growth on oleic acid YNB Glucose -0.0 -1.0 0.0 -1.1 0.1
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.6 -0.1 -1.4 0.4
growth on oleic acid YNB Oleic Acid -0.1 -1.0 -0.0 -0.1 -0.3
auxotrophy YNB Glucose 0.3 -0.4 0.1 -1.7 0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 -0.3 -0.1 -0.5 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.5 0.2 -0.7 0.0
growth on ricinoleic acid YNB Glucose 0.5 -0.8 0.3 -1.0 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.2 0.3 -0.5 -0.1
auxotrophy YNB Glucose 75mM Arginine 0.3 -0.2 0.0 -1.3 0.6
facs on lipid accumulation Sorted Low BODIPY Gate 0.3 -0.4 -0.0 0.1 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 0.8 0.1 -1.6 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.1 0.1 -0.1 -0.4 -0.1
auxotrophy Dropout Complete 0.2 -0.2 0.1 -0.8 0.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.4 -0.5 0.6 -1.3 0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3 -0.5 0.1 -0.5 0.5
growth on ypd YPD 0.3 -0.5 0.2 0.4 -0.4
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.4 0.1 -0.8 0.1
ypd buoyancy 40 hrs High Buoyancy 0.2 0.6 -0.1 -0.6 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.0 0.5 0.1 -0.0 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.0 0.2 -0.0 0.2 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.8 -0.8 0.6 -0.2 0.7
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