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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1362: 9730 - K00507 SCD, desC stearoyl-CoA desaturase (Delta-9 desaturase), at 92515 to 94818
9730
mRNA_1363: 9731 - K11147 DHRS4 dehydrogenase/reductase SDR family member 4, at 98069 to 99768
9731
mRNA_1364: 9732 - SUPERFAMILY--SSF48452, at 100548 to 102445
9732
mRNA_1365: 9733 - K17260 ACTR2, ARP2 actin-related protein 2, at 103522 to 105237
9733
mRNA_1366: 9734 - K00661 maa maltose O-acetyltransferase, at 105397 to 106460
9734
Group
Condition
mRNA_1362
mRNA_1363
mRNA_1364
mRNA_1365
mRNA_1366
9730
9731
9732
9733
9734
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.7
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.3
-0.3
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.3
0.1
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.1
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
0.4
-0.3
-0.4
growth on oleic acid
YNB Oleic Acid
0.1
-0.2
-0.1
growth on ypd
YPD
-0.1
-0.1
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
-0.3
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
-0.2
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
0.2
0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
0.0
-0.4
0.5
auxotrophy
YNB Glucose 75mM Methionine
0.1
0.2
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.3
-0.1
0.0
auxotrophy
Dropout Complete
0.3
0.1
-0.1
auxotrophy
YNB Glucose 75mM Arginine
0.2
0.3
-0.1
growth on oleic acid
YNB Glucose
0.4
0.0
-0.0
auxotrophy
YNB Glucose
0.4
0.3
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.5
0.1
0.2
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
0.3
0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.0
0.4
0.6
growth on ricinoleic acid
YNB Glucose
0.1
0.1
1.1
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