Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1356: 9724 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 74218 to 78285 9724 mRNA_1357: 9725 - BLAST ATP-citrate synthase [Microbotryum lychnidis-dioicae ..., at 79515 to 80146 9725 mRNA_1358: 9726 - K01648 ACLY ATP citrate (pro-S)-lyase, at 80345 to 84761 9726 mRNA_1359: 9727 - K06018 PPN1 endopolyphosphatase, at 85771 to 88302 9727 mRNA_1360: 9728 - K01054 MGLL acylglycerol lipase, at 88622 to 90157 9728
Group Condition mRNA_1356 mRNA_1357 mRNA_1358 mRNA_1359 mRNA_1360
9724
9725
9726
9727
9728
facs on lipid accumulation Sorted High BODIPY Gate -0.2 0.2   -1.4 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.3   -1.3 0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.3   -0.9 -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.0 -0.3   -0.6 -0.1
auxotrophy Dropout Complete 0.2 -0.2   -0.9 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 0.2   -1.0 -0.4
auxotrophy YNB Glucose 75mM Methionine 0.1 0.0   -0.9 0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 -0.6   -0.5 0.2
auxotrophy YNB Glucose 0.1 -0.2   -0.5 0.0
auxotrophy YNB Glucose 75mM Arginine 0.2 -0.1   -0.5 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 0.1   -0.4 -0.1
growth on ricinoleic acid YNB Glucose 0.1 -0.1   -0.4 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 0.3   -0.0 -0.8
growth on oleic acid YNB Oleic Acid 0.0 0.4   -0.2 -0.6
growth on ypd YPD -0.3 0.1   -0.2 0.2
growth on oleic acid YNB Glucose -0.0 0.4   -0.3 -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.1   -0.4 0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 0.4   0.1 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 0.3   0.3 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 -0.5   1.1 0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.4 0.4   0.5 0.3
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