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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1356: 9724 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 74218 to 78285
9724
mRNA_1357: 9725 - BLAST ATP-citrate synthase [Microbotryum lychnidis-dioicae ..., at 79515 to 80146
9725
mRNA_1358: 9726 - K01648 ACLY ATP citrate (pro-S)-lyase, at 80345 to 84761
9726
mRNA_1359: 9727 - K06018 PPN1 endopolyphosphatase, at 85771 to 88302
9727
mRNA_1360: 9728 - K01054 MGLL acylglycerol lipase, at 88622 to 90157
9728
Group
Condition
mRNA_1356
mRNA_1357
mRNA_1358
mRNA_1359
mRNA_1360
9724
9725
9726
9727
9728
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
0.2
-1.4
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.3
-1.3
0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.3
-0.9
-0.2
ypd buoyancy
40 hrs Low Buoyancy
0.0
-0.3
-0.6
-0.1
auxotrophy
Dropout Complete
0.2
-0.2
-0.9
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
0.2
-1.0
-0.4
auxotrophy
YNB Glucose 75mM Methionine
0.1
0.0
-0.9
0.0
ypd buoyancy
40 hrs No Buoyancy Separation
0.3
-0.6
-0.5
0.2
auxotrophy
YNB Glucose
0.1
-0.2
-0.5
0.0
auxotrophy
YNB Glucose 75mM Arginine
0.2
-0.1
-0.5
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
0.1
-0.4
-0.1
growth on ricinoleic acid
YNB Glucose
0.1
-0.1
-0.4
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
0.3
-0.0
-0.8
growth on oleic acid
YNB Oleic Acid
0.0
0.4
-0.2
-0.6
growth on ypd
YPD
-0.3
0.1
-0.2
0.2
growth on oleic acid
YNB Glucose
-0.0
0.4
-0.3
-0.1
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.1
-0.4
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
0.4
0.1
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
0.3
0.3
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
-0.5
1.1
0.7
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.4
0.4
0.5
0.3
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