Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1353: 9721 - HMMPfam-Starch binding domain-PF00686,ProSiteProfiles-CBM20 (carbohydrate binding type-20) domain profile.-PS51166,SMART-Starch binding domain-SM01065,SUPERFAMILY--SSF49452, at 67980 to 69503 9721 mRNA_1354: 9722 - Hypothetical Protein, at 69556 to 71202 9722 mRNA_1355: 9723 - SUPERFAMILY--SSF50685, at 72198 to 73021 9723 mRNA_1356: 9724 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 74218 to 78285 9724 mRNA_1357: 9725 - BLAST ATP-citrate synthase [Microbotryum lychnidis-dioicae ..., at 79515 to 80146 9725
Group Condition mRNA_1353 mRNA_1354 mRNA_1355 mRNA_1356 mRNA_1357
9721
9722
9723
9724
9725
ypd buoyancy 40 hrs No Buoyancy Separation -0.8 0.0 -0.1 0.3 -0.6
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.2 -0.1 0.0 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 0.0 -0.3 -0.1 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.0 0.1 -0.1 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.6 0.3 0.1 -0.2 0.2
auxotrophy YNB Glucose 75mM Arginine 0.0 -0.1 0.0 0.2 -0.1
auxotrophy YNB Glucose 0.0 0.0 0.1 0.1 -0.2
growth on ypd YPD 0.3 -0.0 -0.0 -0.3 0.1
auxotrophy Dropout Complete -0.0 -0.0 0.0 0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy 0.0 -0.0 0.1 -0.1 0.1
growth on ricinoleic acid YNB Glucose -0.2 0.2 0.2 0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 0.2 0.1 0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 0.0 0.4 -0.1 0.4
auxotrophy YNB Glucose 75mM Methionine 0.2 0.1 -0.0 0.1 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 0.0 0.3 0.1 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.5 -0.1 0.4 0.2 -0.5
growth on oleic acid YNB Oleic Acid 0.0 -0.0 0.1 0.0 0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 -0.0 0.2 0.3 0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 -0.1 0.2 0.3 0.2
growth on oleic acid YNB Glucose 0.0 0.1 0.4 -0.0 0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 -0.0 0.6 0.4 0.4
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