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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1329: 9697 - HMMPfam-SUZ domain-PF12752,ProSiteProfiles-SUZ domain profile.-PS51673, at 8055 to 8960
9697
mRNA_1330: 9698 - HMMPfam-LCCL domain-PF03815,ProSiteProfiles-LCCL domain profile.-PS50820,SUPERFAMILY--SSF69848, at 9234 to 11606
9698
mRNA_1331: 9699 - KOG2273 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins, at 11969 to 15219
9699
mRNA_1332: 9700 - K00232 E1.3.3.6, ACOX1, ACOX3 acyl-CoA oxidase, at 15782 to 19108
9700
mRNA_1333: 9701 - K08286 E2.7.11.- protein-serine/threonine kinase, at 21280 to 24099
9701
Group
Condition
mRNA_1329
mRNA_1330
mRNA_1331
mRNA_1332
mRNA_1333
9697
9698
9699
9700
9701
growth on oleic acid
YNB Oleic Acid
0.1
-0.1
-0.7
growth on ypd
YPD
-0.1
-0.2
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.2
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.1
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
0.1
-0.3
auxotrophy
YNB Glucose 75mM Methionine
0.1
-0.1
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.0
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
0.1
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.0
-0.1
-0.2
auxotrophy
Dropout Complete
0.0
-0.1
-0.1
growth on oleic acid
YNB Glucose
0.1
-0.0
-0.2
auxotrophy
YNB Glucose
0.1
0.2
-0.2
growth on ricinoleic acid
YNB Glucose
0.2
0.2
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
0.4
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.2
0.1
0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
0.4
0.4
-0.5
ypd buoyancy
40 hrs High Buoyancy
-0.3
0.4
0.4
facs on lipid accumulation
Sorted High BODIPY Gate
0.3
0.3
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.6
0.2
-0.2
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