Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1329: 9697 - HMMPfam-SUZ domain-PF12752,ProSiteProfiles-SUZ domain profile.-PS51673, at 8055 to 8960 9697 mRNA_1330: 9698 - HMMPfam-LCCL domain-PF03815,ProSiteProfiles-LCCL domain profile.-PS50820,SUPERFAMILY--SSF69848, at 9234 to 11606 9698 mRNA_1331: 9699 - KOG2273 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins, at 11969 to 15219 9699 mRNA_1332: 9700 - K00232 E1.3.3.6, ACOX1, ACOX3 acyl-CoA oxidase, at 15782 to 19108 9700 mRNA_1333: 9701 - K08286 E2.7.11.- protein-serine/threonine kinase, at 21280 to 24099 9701
Group Condition mRNA_1329 mRNA_1330 mRNA_1331 mRNA_1332 mRNA_1333
9697
9698
9699
9700
9701
growth on oleic acid YNB Oleic Acid 0.1 -0.1   -0.7  
growth on ypd YPD -0.1 -0.2   -0.2  
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.2   -0.1  
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.1   -0.1  
auxotrophy YNB Glucose 75mM Arginine -0.1 0.1   -0.3  
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.1   -0.4  
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.1   -0.1  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.0   -0.1  
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.1   -0.2  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.1   -0.0  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 -0.1   -0.2  
auxotrophy Dropout Complete 0.0 -0.1   -0.1  
growth on oleic acid YNB Glucose 0.1 -0.0   -0.2  
auxotrophy YNB Glucose 0.1 0.2   -0.2  
growth on ricinoleic acid YNB Glucose 0.2 0.2   -0.4  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 0.4   -0.0  
ypd buoyancy 40 hrs Median Buoyancy -0.2 0.1   0.3  
growth on ricinoleic acid YNB Ricinoleic Acid 0.4 0.4   -0.5  
ypd buoyancy 40 hrs High Buoyancy -0.3 0.4   0.4  
facs on lipid accumulation Sorted High BODIPY Gate 0.3 0.3   -0.1  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.6 0.2   -0.2  
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