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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1317: 9685 - K10586 BIRC6, BRUCE baculoviral IAP repeat-containing protein 6 (apollon), at 912898 to 915094
9685
mRNA_1318: 9686 - KOG1773 Stress responsive protein, at 917910 to 918381
9686
mRNA_1319: 9687 - KOG0404 Thioredoxin reductase, at 918921 to 919455
9687
mRNA_1320: 9688 - K00384 trxB thioredoxin reductase (NADPH), at 921443 to 923748
9688
mRNA_1321: 9689 - K01687 ilvD dihydroxy-acid dehydratase, at 924621 to 927018
9689
Group
Condition
mRNA_1317
mRNA_1318
mRNA_1319
mRNA_1320
mRNA_1321
9685
9686
9687
9688
9689
auxotrophy
Dropout Complete
-0.4
-1.2
-1.0
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-1.0
-1.0
growth on ypd
YPD
-0.6
-0.4
-0.7
auxotrophy
YNB Glucose
-0.3
-1.0
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.8
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.2
-0.7
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
-1.4
0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.3
-1.4
0.7
facs on lipid accumulation
Sorted Low BODIPY Gate
0.5
-1.1
0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.8
-0.2
0.9
growth on ricinoleic acid
YNB Glucose
0.2
-0.6
0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.1
0.1
0.2
growth on oleic acid
YNB Glucose
-0.0
0.6
-0.2
growth on oleic acid
YNB Oleic Acid
-0.2
0.7
0.3
facs on lipid accumulation
Sorted No BODIPY Gate
0.5
0.3
0.1
ypd buoyancy
40 hrs Median Buoyancy
0.0
0.3
0.7
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
1.0
0.5
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
1.3
0.3
ypd buoyancy
40 hrs High Buoyancy
0.1
0.7
0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
0.8
0.8
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
1.2
1.1
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